Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3051 ATGGCACCTATGTTCAATTGGTGGGGGAAGGAGAAGAACCACCGCGGTGGCGGAACCCCTGTGGTGGTCAAAATGGAGAATCCGAACTGGTCCATGGTGGAGCTTGAAGGTCCCTCCGATGAAGATTTCATCATTGCAGACCCTTCTTCAGGGATTCACAGAGACAAAGGAAGAGGGAAGAACGCCAAGCAGCTGACATGGGTTCTCCTTCTCAAAGCTCACAGAGCCGCAGGTTGTCTCGCCTCTGTGGCCCCTGCATTGTTCAGCCTCGTCTCCGCCGTGAAACGCCGCGTGGCTTCCGGGAGAACCGATGTTGACGGCGAGGGTGTCGGTGGTGGGAGGGGGAACGAGAGTGCCACCGTGAGGACAAGATTCTATTCCTGCATCAAGGTGTTTCTCTGGGTTTCGGTTCTTCTTCTCTGTTTTGAGGTTGCTGCGTACTTCAAAGGTTGGCATTTCGGTGCACCGAGTCTTCAGTTTGAGAATTTGTGGGTTTCTTCTTCGTTTGGTGTGAAGGGTGTGTTTGATTGGATTTATTCTAGGTGGGTTTTGACTCGTGTGGAGTATCTTGCTCCACCTCTTCAGTTTCTGGCATATATGTGTATTATTCTCTTCATTATTCAGAGTTTGGATAGGTTAGTCCTCTGTTTAGGTTGTTTTTGGATCCGGTTTAAGAAGATCAAGCCTGTTCCGAAAGATGGTGAAGTGGATCAGGAATCTGGTGAGAAGGGTTTCTTCCCTCTTGTGCTAGTGCAGATCCCCATGTGTAATGAGAGAGAGGTTTATCAGCAATCAATTGCTGCTTGTTGTAATTTGGATTGGCCTAAATCCAAGTTGCTTATTCAAGTTCTTGATGATTCTGATGATCCCACAACTCAGTTGTTGATCAAGGAAGAGGTTAACAAATGGCAGCAAGAAGGTGCCAACATTATTTACAGGCATCGTGTGATTAGAGAAGGTTACAAGGCTGGTAACTTGAAATCTGCTATGAATTGTAGTTATGTGAAAGACTATGAATTTGTTGCAATTTTTGATGCTGATTTTCAGCCTACCCCGGATTTCCTTAAAAGAACGGTGCCTCATTTTAAGGACAACAGCGAATTGGGGCTTGTTCAGGCAAGATGGTCTTTTGTGAATAAGGATGAGAACTTGTTAACAAGGTTGCAGAACATTAATTTGGCATTCCATTTTGAGGTGGAGCAGCAAGTAAATGGGGTTTTCATTAACTTTTTCGGGTTCAATGGAACGGCCGGAGTGTGGAGAATAAAGGCTTTGGAGGAATCGGGTGGTTGGTTGGAGAGGACCACCGTGGAAGACATGGATATTGCTGTTAGAGCTCATCTTCATGGCTGGAAATTCATCTTCCTCAATGATGTTGAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCCTATAGGAAACAGCAACATAGATGGCACTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTGCCCGACATCATTCGCTCCAAGATAAGCATATGGAAAAAATTCAACTTGATATTCCTCTTCTTTCTTCTTAGGAAATTGATATTACCCTTCTATTCATTTACACTGTTCTGCATAATTCTCCCGATGACAATGTTTATACCTGAGGCCGAGCTTCCCGCCTGGGTTGTTTGTTACATCCCAGCCACCATGTCATTTCTCAACATCCTTCCTGCTCCAAAGGCCTTCCCCTTCATCGTTCCTTACCTTCTCTTTGAGAACACCATGTCAGTTACCAAATTCAATGCCATGATCTCTGGTCTCTTCCAGCTCGGAAGTGCATATGAGTGGGTTGTTACCAAGAAATCGGGTCGTTCCTCCGAGGGCGATCTTGTTTCCTTGATAGAGAAAGGACCAAAGCATCAAAGAGGGGTCTCTGTGCCTGATCTTGAGGAACTTAAAGAAGAAATCCAACTTCAGGAGAAAAAGGCATCAAAGAAAAAAAAGCATAATAGAATCTACATGAAGGAGCTTGCTTTGGCCTTTCTACTCCTAACAGCTTCAGCAAGGAGTCTCCTTTCAGCTCAGGGAATTCACTTCTACTTCTTGCTATTCCAAGGCATATCATTCCTCTTAGTTGGTCTAGACTTGATCGGCGAACAAGTTGACTGA 2121 0.4517 MAPMFNWWGKEKNHRGGGTPVVVKMENPNWSMVELEGPSDEDFIIADPSSGIHRDKGRGKNAKQLTWVLLLKAHRAAGCLASVAPALFSLVSAVKRRVASGRTDVDGEGVGGGRGNESATVRTRFYSCIKVFLWVSVLLLCFEVAAYFKGWHFGAPSLQFENLWVSSSFGVKGVFDWIYSRWVLTRVEYLAPPLQFLAYMCIILFIIQSLDRLVLCLGCFWIRFKKIKPVPKDGEVDQESGEKGFFPLVLVQIPMCNEREVYQQSIAACCNLDWPKSKLLIQVLDDSDDPTTQLLIKEEVNKWQQEGANIIYRHRVIREGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNSELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISIWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKHQRGVSVPDLEELKEEIQLQEKKASKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3051 706 Coils Coil 633 653 - -
Lja5g3051 706 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 239 464 IPR029044 -
Lja5g3051 706 SUPERFAMILY Nucleotide-diphospho-sugar transferases 249 528 IPR029044 -
Lja5g3051 706 PANTHER - 13 705 - -
Lja5g3051 706 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 13 705 - -
Lja5g3051 706 Pfam Glycosyl transferase family group 2 341 537 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3051 Lja-Chr5 59849808 59854126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3051 1 706 Miscellaneous Gene Families AT4G07960 78.042 0.0 1086
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3051 - - zju:107420618 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3051 5 59849808 59854126 Lja5g3051 5 59849808 59854126 ECH