Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3045 ATGTCGAGGAGACCGGGGAATCCTTCTCGAAGGTTCGGGGACAGTTCCAAATCTAGGTCCTCGCCGATTTTGTCCGTTGGCCTCATAGTCTTGGGAAGTTTGTTTCTCATTGCGTATTTTTATAGGGGCTCAGGTGGATTGGGGAGCCATTTGGATTCTGTAAGCAGGGTTGAAGCAGGTGATTATTTGTGCAGTGGAGAGGTCCAGCGAGCAATTCCCATTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTATTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGCTAAAGGAGGACGAAACCGAAGCCTGGGGTATAGAACCATACGATATAGAGGATGCTGATAGTAATTGCAAATCACTTATCCGTAGAGGCAGCGTGCGCGTGGCTGATATCAAGTTTCCTCTACCATATAGGCCAAAGTCTTTCTCTCTTGTAATTGTTTCAGATACTCTGGATTACCTATCTCCCAGATACCTCAATAAAACTCTTCCAGATTTGGTGAGGGTATCAGCTGATGGTTTAGTGATATTTACTGGTTTTCCCACTAATCAAAAGGCCAAGGTAGCAGATGTTTCTAAATTTGGAAGAGCGGCCAAGATGAGGAGTTCATCCTGGTGGGTCAAGTATTTCCTTCAGACCAACTTGGAAGAAAATGAAGCTGCTTATAAGAAGTTTGAGCAAGCCTCAACAAAGAGTTCATATGTTCCCAAATGCCAGATATTCCACCTGAAGTCACTCCATTGA 762 0.4383 MSRRPGNPSRRFGDSSKSRSSPILSVGLIVLGSLFLIAYFYRGSGGLGSHLDSVSRVEAGDYLCSGEVQRAIPILQKAYGDSMHKVLHVGPDTCYVVSKLLKEDETEAWGIEPYDIEDADSNCKSLIRRGSVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPDLVRVSADGLVIFTGFPTNQKAKVADVSKFGRAAKMRSSSWWVKYFLQTNLEENEAAYKKFEQASTKSSYVPKCQIFHLKSLH* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3045 253 Gene3D Vaccinia Virus protein VP39 68 247 IPR029063 -
Lja5g3045 253 MobiDBLite consensus disorder prediction 1 20 - -
Lja5g3045 253 PANTHER PROTEIN, PUTATIVE-RELATED 1 253 - -
Lja5g3045 253 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 189 IPR029063 -
Lja5g3045 253 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 253 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3045 Lja-Chr5 59712903 59716249 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3045 K23871 - gmx:100805476 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3045 5 59712903 59716249 Lja5g3045 5 59712903 59716249 ECH