Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3021 ATGAACCCAAACCCTTCACATCAACCTCCACCTTCTTCCACCTACCAGCCCATGCTCAAGGAATCGATCAACCGCTTCTTAGCCGAGTATCGTCGAGGCGCTACTGATTTCGGCGATTTCAGCTCCATCTTCTCCAGAATCCTCCACAGCACCCCTGACCCGCCGATTCAGCTTGTTTGGTTCTACTCCGCCCTGGAATTTCACACCAACAAGCTGGGACCTGCTGCAGATGAATCTTCTAGAAGAGTTTCCGTGGCTAAGGGTTTGTTCCAGTTGCTGGTTTCGTGTTCGGGGTGCTGCGGGTCCATGAAGAGGATCGGTGTTCTTGCGCCGTTGGTGTTCGAGCTGTGCCGGTTGGTTGTTCACCGCGAGAGGGAGGTGGAGGGGTTGGTGGAAGGGCTTGTTAGTTATTGCAGTATTTTGTGTGGGGACGTGGTTCATGGTGATGACGGGGTGGCGATTTTGGAGCCGGATTTTGTGGATTTGATGCCGGTGTGGATGGTTGATCGTGATGGTTCATGTGGGGTGGTTGGGGATTGCGTGAAGGGGTTTTTCCCTCTCGCGAGCGATGGGATTCGGAAGGGGATTGAGATGGGTTGTGATGTTGGGTCCTTGGCTGGGATTGTCATGTGTGAAGCTCTGTTGTTGAAAATGTGCTTCGCGTTTGATTCGGGGATGGCTAGAGAGGAGCTGGAGAAGAAGTTGCACGCTTCCGCGGTTCAGACCATAACAGGGTTTCGGAATTCTTACTTCCTAGATACCCTTGTCAGGATGATGTTGGAGCCAGTTTTGCCAGTGGTCTCCCTACTGGGTTCTGAAAATGAAGTTCTTCTAAAAGAAGTCTTGTACCGTTCTGTGATGATGATGGATTATTCATTCATTAATCCCCAAGCCAGAGTTTCACTGTATGCCAACAGCTTGAAAGATTTGGCTATAAATTGGTTGTTTGTTGCTGAATTAGCTGTACAGTCTGCTAGGGAAAAAGGTGATCAGGGGAAAGCTATTTCTTATGTAAGTGCCTTCTGTAGGTCCTGCATACCCATTCAATTGATCAACTGGGTTATTAGTCAAAGTGGCGTAGGCAGAAAGATCACCAGACCCAATGTTTCCACTCCCATAGCTCTCATAAAGTGGCTTCTAGTTGTTGAGGAGCAAGGATTGGCAGCATTTGGTGATGAAACCGCCAAGCATGGTGCAAAAGCTAACATTTTCACTTCAAGAACAAAGTGCCTGCTGCCAGTGATCAAACATAACTTTAACACTCTGGATAAAAATCTCTTTTCGAATTCTCTACATGGAGGCACGGAGGCAGGTAAAATTGATGGTGATATAGAGATGCATGATACCGCGGACACTGCGGTAAGTTTGTCTTCTGATGGTAGAATGAACACAGCAGCCAGCACTGATGGAACAAGGAAACGCAAAGAAGGGATCGAAGATGATACTAAAGCACAGCTAAAGTTCATGAGATGCCAGTTTCATGAGAATTCAGTGAGAGAAAACTCATTTATATTTGGGCAACAGTGA 1527 0.4754 MNPNPSHQPPPSSTYQPMLKESINRFLAEYRRGATDFGDFSSIFSRILHSTPDPPIQLVWFYSALEFHTNKLGPAADESSRRVSVAKGLFQLLVSCSGCCGSMKRIGVLAPLVFELCRLVVHREREVEGLVEGLVSYCSILCGDVVHGDDGVAILEPDFVDLMPVWMVDRDGSCGVVGDCVKGFFPLASDGIRKGIEMGCDVGSLAGIVMCEALLLKMCFAFDSGMAREELEKKLHASAVQTITGFRNSYFLDTLVRMMLEPVLPVVSLLGSENEVLLKEVLYRSVMMMDYSFINPQARVSLYANSLKDLAINWLFVAELAVQSAREKGDQGKAISYVSAFCRSCIPIQLINWVISQSGVGRKITRPNVSTPIALIKWLLVVEEQGLAAFGDETAKHGAKANIFTSRTKCLLPVIKHNFNTLDKNLFSNSLHGGTEAGKIDGDIEMHDTADTAVSLSSDGRMNTAASTDGTRKRKEGIEDDTKAQLKFMRCQFHENSVRENSFIFGQQ* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3021 508 PANTHER SNF2 DOMAIN PROTEIN 3 506 - -
Lja5g3021 508 PANTHER OS01G0600300 PROTEIN 3 506 - -
Lja5g3021 508 MobiDBLite consensus disorder prediction 459 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3021 Lja-Chr5 59166322 59169994 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3021 - - mtr:MTR_1g016740 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3021 5 59166322 59169994 Lja5g3021 5 59166322 59169994 ECH