Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3018 ATGTCCCCAGAAGTGCAGGGTCTAACTCCAGAAGAATTCACAGAAGTCGAACCAATCATAAAAAAATACCACATCTTCGAGCCTACACCAAACGCCTGCACCTCCATCATAACCTACCGAATCGATGCTCCAGCAAACAGGGTGTGGCCATTCGTGAGAAGCTTCGAGAATCCTCAGAAGTACAAGCACTTCATCAAAGGCTGCAACATGCAAGGTGACGGTGGCGTCGGTAGCATTAGAGAAGTCACCGTCGTCTCGGGCCTCCCGGCGTCAACCAGCACCGAGAGGCTCGAGATTCTCGATGATGACAAGCACGTGCTCAGCTTCAGGGTCGTCGGCGGCGAGCACCGGCTCCAAAACTACCGTTCTGTGACGTCGGTGAATGAGTTTTGTTCAAGTGAGGGGAAGGTTTACACGTTGGTGTTGGAGTCTTATATAGTGGACATACCGGATGGGAACACGGCGGAAGACACTAAGATGTTTGTTGACACGGTGGTGAAGCTCAACCTTCAGAAACTGGGGGTGGTGGCGATGGCGGCAACGTCAATGCAAGGACAATAA 561 0.5187 MSPEVQGLTPEEFTEVEPIIKKYHIFEPTPNACTSIITYRIDAPANRVWPFVRSFENPQKYKHFIKGCNMQGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLQNYRSVTSVNEFCSSEGKVYTLVLESYIVDIPDGNTAEDTKMFVDTVVKLNLQKLGVVAMAATSMQGQ* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3018 186 CDD PYR_PYL_RCAR_like 40 173 - -
Lja5g3018 186 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 11 182 - -
Lja5g3018 186 Gene3D - 2 186 IPR023393 -
Lja5g3018 186 PANTHER - 11 182 - -
Lja5g3018 186 SUPERFAMILY Bet v1-like 33 174 - -
Lja5g3018 186 Pfam Polyketide cyclase / dehydrase and lipid transport 40 173 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3018 Lja-Chr5 59128660 59129575 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3018 K14496 - gmx:100778183 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3018 5 59128660 59129575 Lja5g3018 5 59128660 59129575 ECH