Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3009 ATGATTGCTTGGTGTTGTCAAAACCAGCTAGAGAGTGAAGCAGAAGCAGAAGCAGAAGCAGAGAGAGCTCCATTGCAACCAACAATGGCCACAATCCCCATTCGCATCTCTGTCACACCCACCTTCACCTCCTCCTTCACCACCAAACTCCCTTCAAAACGAAACCACCATTTCTCGTGTTTCACCTCTCGGAACCCAACACAGTGTCCTGTTCCACGCGAACAGCAACCCGTCAACGAGTACCAGTCCCTCTCCACCTCCTTCCCCTTTTCATGGGCCGCCGGCGACGTCGTCGAGTACACCTCCCGCCTCGCCGTCACGGGCCTCTCCTTCGCCGTCTTCGTCGGCCTGCCTGTCGCGTTGTTCGGCTCCGTCGGATCGCAGTCGGAGCTGCTGAAGCGAGTCCTGTGCGCCGCTTGTAGTGGGGTTGGGGCGGTGACCCTCGCCGTTGTTAGGATGTATCTCGGTTGGGCTTACGTCGGCAACCGCTTGCTCAGTGCCACCGTTGAGTATGAGGAGACAGGGTGGTATGATGGTCAGGTATGGGTGAAGACTGCTGAAGTTTTGGCCCGTGATAGACTCTTGGGATCATTTTCTGTCAAGCCTGTACTGAGAAGATTGAAAGTCACTTTAGTCGGTCTGGCAACGTGCTTGCTTGCATCTGCTCTTATCCTCATTAACATTGATGGGTACCAAAATGAACTTAATCTAAGATCAAATGAAGCTGGAGTTCGAGTTATACCTGGAGTTTACAATGATGAATCTGCAAGATCATTTGAACCAGATGCCTTTTGTGGTGAACCTAATCTTCAATGA 816 0.5208 MIAWCCQNQLESEAEAEAEAERAPLQPTMATIPIRISVTPTFTSSFTTKLPSKRNHHFSCFTSRNPTQCPVPREQQPVNEYQSLSTSFPFSWAAGDVVEYTSRLAVTGLSFAVFVGLPVALFGSVGSQSELLKRVLCAACSGVGAVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKTAEVLARDRLLGSFSVKPVLRRLKVTLVGLATCLLASALILINIDGYQNELNLRSNEAGVRVIPGVYNDESARSFEPDAFCGEPNLQ* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3009 271 PANTHER OS05G0539900 PROTEIN 34 269 - -
Lja5g3009 271 PANTHER - 34 269 IPR009631 -
Lja5g3009 271 Pfam Conserved in the green lineage and diatoms 27 69 212 IPR009631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3009 Lja-Chr5 59007590 59010587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3009 - - lja:Lj5g3v0391640.2 525.398