Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2998 ATGGAGCGCGCACGGAGACTCGCCAACCGCGCCATTCTCAAGCGTTTGGTTTCCGAAGCGAAGCACAACCGAAAGCATGAACCGGTGTGGAACTCCGCCGCCGCCTCCACCACCACCGTGCCGTTTTACTCCGCTTCTTCCTCCCGGTACGTGTCCTCTGTTTCTCACTCTGTTCTCAGAAACAGAGGATCCAAATCAGCCACCAACATTCCACGCGCCGCCGCGGGTTTATCCCAGACCCGATCGATCTCCGTGGAGGCGCTTCAACCCAGCGACACGTTCCCGAGACGGCACAACTCCGCTACACCAGAAGAACAAGCCAAGATGTCACTGGCTTGTGGCTTCGACAACGTTGATTCCCTCGTAGACGCTACTGTACCGAAATCGATTCGGTTGAAGGAGATGAAGTTCAACAAGTTCGATGGAGGATTAACAGAAGGGCAAATGATCGAGCACATGAAGGAGTTAGCATCGAAGAACAAGGTTTTCAAGTCGTTCATTGGAATGGGGTACTACAACACCCATGTTCCTCCTGTGATCTTGAGGAACATCATGGAGAATCCAGCTTGGTACACACAGTACACTCCTTACCAGGCTGAGATTTCTCAGGGGAGGCTTGAATCGTTGTTGAATTATCAGACCATGATTACGGATCTCACTGGTTTGCCTATGTCCAATGCTTCATTGCTTGATGAAGGTACTGCTGCAGCTGAAGCAATGTCTATGTGCAACAACATTCAGAAGGGGAAGAAGAAGACATTCATCATTGCAAGTAACTGCCACCCACAAACCATTGATATTTGCAAGACCAGAGCTGATGGTTTTGAACTCAAGGTTGTGGTGGCTGATCTTAAGGACATTGATTACAAATCTGGTGATGTTTGTGGTGTTCTTGTTCAGTATCCTGGTACTGAGGGTGAGGTTTTGGATTATGGGGAGTTTATTAAGAAAGCTCATGCTCATGAGGTGAAGGTTGTTATGGCTTCTGATCTTTTGGCATTGACTGCGTTGAAGCCTCCCGGTGAGTTCGGGGCAGATATTGTCGTTGGCTCGGCTCAGAGGTTCGGGGTTCCAATGGGTTATGGTGGTCCTCATGCTGCTTTTCTGGCCACATCACAGGAGTACAAGAGGATGATGCCTGGGAGAATCATTGGTGTTAGTGTTGATTCTTCAGGAAAGAGTGCTTTGAGAATGGCAATGCAAACTAGGGAGCAGCATATCCGTAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTATATCATGGACCTGAAGGCCTTAAAGCCATTAGCCAACGTGTTCATGGTCTTGCTGGGGCATTTGCTCTGGGGTTAAAGAAACTTGGAACTGTGGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTTCCAATGCACATGCAATTGCTGATGCTGCTCTCAAAAGTGAAATAAACTTGCGAGTTGTAGATGGAAACACTATTACTGTTGCTTTTGATGAAACAATCACATTAGAGGATGTTGACAAGCTTTTCCAAGTGTTTGCTGGTGGCAAGCCTGTCTCCTTCACATCTGCATCACTTGCGCCAGAAGTCCAGAGTCCAATTCCTTCTGGACTAGCTAGGGAGAGCCCTTTTCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTCAGATACATTCATAGGCTGCAATCGAAGGATCTATCACTATGCCACAGTATGATCCCACTGGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCCAGCTTCACTGATATTCACCCTTTTGCACCAGTTGAACAGGCTCAAGGTTATCAGGAAATGTTCAACAATTTGGGTGATCTGTTGTGTACCATCACTGGGTTTGACTCTTTCTCCTTGCAACCGAATGCTGGTGCTGCTGGAGAATATGCTGGACTGATGGTTATTCGCGCATATCATTTGTCAAGAGGAGATCACCACCGCAATGTTTGCATTATACCTGTCTCAGCACATGGTACCAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCACAATCGGAACCGATGCCAAAGGAAACATTAACATTGATGAGTTGAGGACGGCTGCTGAAAAAAATAAGGACAACTTATCTGCACTTATGGTGACATATCCTTCCACCCATGGTGTTTATGAAGAAGGTATTGATGAGATTTGCAAGATCATTCATGATAATGGAGGCCAAGTGTATATGGATGGTGCCAACATGAATGCACAGGTGGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGTCATCTCAATCTCCACAAGACATTTTGCATTCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGCAACACTTGGCACCATTTTTACCTTCACACCCAGTGATACCCACTGGTGGAATTCCTGCCCCTGACAACTCTCAACCACTTGGTACCATCTCTGCTGCACCTTGGGGTTCAGCACTCATCTTGCCAATCTCTTACACTTACATTGCCATGATGGGTTCTCAAGGACTCACAGATGCATCAAAGATAGCCATTTTAAATGCAAACTACATGGCCAAACGATTGGAGAACTATTACCCTGTTCTTTTCCGTGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACTTGAGAGGCTTTAAGAATACTGCTGGAATTGAGCCCGAAGATGTCGCGAAACGCCTCATGGATTACGGGTTCCATGGACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTTTGTGATGCTCTTATTTCCATAAGACAAGAAATTGCTGAGATTGAGAAAGGAAAGGCTGACATTAACAACAATGTACTCAAGGGAGCTCCTCATCCACCATCATTGCTCATGGCAGATGCATGGACAAAACCATACTCCAGGGAGTGCGCAGCCTTCCCAGCTTCATGGCTCAGGGTTGCCAAGTTCTGGCCTACCACAGGACGTGTTGACAACGTGTATGGTGACCGCAACCTCATCTGCACCCTTCTCCCAGCATCACATGCTGTTGAAGAACAAGCTGCTGCAACAGCTTAG 3165 0.4711 MERARRLANRAILKRLVSEAKHNRKHEPVWNSAAASTTTVPFYSASSSRYVSSVSHSVLRNRGSKSATNIPRAAAGLSQTRSISVEALQPSDTFPRRHNSATPEEQAKMSLACGFDNVDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKELASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVADLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKKAHAHEVKVVMASDLLALTALKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAISQRVHGLAGAFALGLKKLGTVEVQDLPFFDTVKVKTSNAHAIADAALKSEINLRVVDGNTITVAFDETITLEDVDKLFQVFAGGKPVSFTSASLAPEVQSPIPSGLARESPFLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPVEQAQGYQEMFNNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNINIDELRTAAEKNKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKQHLAPFLPSHPVIPTGGIPAPDNSQPLGTISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLENYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGKADINNNVLKGAPHPPSLLMADAWTKPYSRECAAFPASWLRVAKFWPTTGRVDNVYGDRNLICTLLPASHAVEEQAAATA* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2998 1054 Gene3D Aspartate Aminotransferase, domain 1 166 519 IPR015422 GO:0003824
Lja5g2998 1054 Pfam Glycine cleavage system P-protein 555 816 IPR020581 GO:0004375|GO:0006546
Lja5g2998 1054 Pfam Glycine cleavage system P-protein 97 523 IPR020581 GO:0004375|GO:0006546
Lja5g2998 1054 Gene3D - 177 437 IPR015421 GO:0003824
Lja5g2998 1054 Gene3D - 605 838 IPR015421 GO:0003824
Lja5g2998 1054 SUPERFAMILY PLP-dependent transferases 558 1039 IPR015424 -
Lja5g2998 1054 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1054 IPR020581 GO:0004375|GO:0006546
Lja5g2998 1054 SUPERFAMILY PLP-dependent transferases 97 524 IPR015424 -
Lja5g2998 1054 CDD GDC-P 566 961 IPR020581 GO:0004375|GO:0006546
Lja5g2998 1054 CDD GDC-P 146 523 IPR020581 GO:0004375|GO:0006546
Lja5g2998 1054 TIGRFAM gcvP: glycine dehydrogenase 97 1038 IPR003437 GO:0004375|GO:0006544
Lja5g2998 1054 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1054 - -
Lja5g2998 1054 Gene3D Aspartate Aminotransferase, domain 1 853 992 IPR015422 GO:0003824
Lja5g2998 1054 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 88 1045 IPR003437 GO:0004375|GO:0006544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2998 K00281 - gmx:100777528 1904.41