Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2992 ATGGCGGAAGCAATATCGCCGGGAAAGAGAACCTTCATTTCGTTAGAAGAGCTAAAGCAACACAACAAGCGCGGCGACGCGTGGATCTCAATCGACGGCAAGATCTACGACGTCTCCGACTGGCTCAACCAACACCCCGGCGGCGAGCTTCCCCTCCTCAACCTCGCCGGCCAGGACGTCACCGACGCGTTCCTCGCCCTCCACCCTGTCTCCGCTCGCCGCAACCTCCCCGCCCTCTTCACCGGCGTCTACCTCCGCGACTACGCCGTCTCCGACGTCTCCCGCGACTACCGGAGCCTCGCCTCGGAGCTCACGAAGATGGGTCTCTTCGACAAGAAGGAGCACGGCGCGCTCATCTCGCTCTGCGTCATGGCGGTGCTGTTCTGCGCCAGCGTCAGCGGGGTTCTCCTCTCCGACAGCGCGTGGGTGCATGTGGGTTGCGCCGCCTTGATGGGGTTCCAGTGGATTCAGAGTGGGTGGATTGGGCATGATTCTGGGCACTACCAGATCATGGTGAACCGGAGATTCAACCGGTTTGTTCAGATCCTCTCTGGGAACTGTCTCACTGGGATCAGCATTGGGTGGTGGAAGTGGAACCACAATGCTCACCACATTGCTTGTAACAGCCTTGACTTTGACCCTGATCTTCAACACTTACCATTCTTTGTGGTTTCTTCCAGGTTCTTTTCTTCACTCACTTCATGCTTCTATGAGAGGAAGATGAACTTTGACCCTGTTGCTAGATTCTTAGTCAGTTACCAGCATTTGTCATATTACCCTGTAATGTGCTTTGCTAGAATCAATTTGTTTGCTCAGTCTTTCATGTTGTTGTTGTCCAAGAGAAAGGTGCCTAATAGATGGGTGGAGCTTTCAGGGTTGCTTGTGTTCTGGATTTGGTATCCATTGTTGGTTTCATGCTTGCCCAATTGGGGTGAGAGGGTTTTGTTTGTGCTTGTTTCATTTTCTGTTACTGGGATTCAGCATGTGCAGTTCACTTTGAATCACTTCTCAGCAAGTGTGTATGTTGGTCCACCAACTGCTCATGATTGGTTTGAGAAGCAGACTCATGGGACTCTTGATGTCAGTTGCTCTCCTTGGATGGATTGGTTTCATGGTGGCTTGCAGTTTCAAGTGGAGCACCACCTTTTTCCGCGGCTTCCCCGGTGCCATCTCAGGAAAATTTCACCCCTGGTTAAGGATCTGTGCAAGAAACACAATCTTCCTTATAATTGTGTGTCCTTCTGGAAAGCCAATGTGCTGACGCTTCGGACGCTCCGGAACGCCGCCTTGCAGGCTCGGGACCTTTCTAATCCTGTTCCCAAGAATTTGGTTTGGGAAGCTGTTAATACTCATGGTTGA 1359 0.5202 MAEAISPGKRTFISLEELKQHNKRGDAWISIDGKIYDVSDWLNQHPGGELPLLNLAGQDVTDAFLALHPVSARRNLPALFTGVYLRDYAVSDVSRDYRSLASELTKMGLFDKKEHGALISLCVMAVLFCASVSGVLLSDSAWVHVGCAALMGFQWIQSGWIGHDSGHYQIMVNRRFNRFVQILSGNCLTGISIGWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFSSLTSCFYERKMNFDPVARFLVSYQHLSYYPVMCFARINLFAQSFMLLLSKRKVPNRWVELSGLLVFWIWYPLLVSCLPNWGERVLFVLVSFSVTGIQHVQFTLNHFSASVYVGPPTAHDWFEKQTHGTLDVSCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKDLCKKHNLPYNCVSFWKANVLTLRTLRNAALQARDLSNPVPKNLVWEAVNTHG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2992 452 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 10 94 IPR001199 -
Lja5g2992 452 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 8 86 IPR036400 -
Lja5g2992 452 CDD Delta6-FADS-like 145 407 - -
Lja5g2992 452 Gene3D - 6 96 IPR036400 -
Lja5g2992 452 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 9 451 - -
Lja5g2992 452 Pfam Fatty acid desaturase 142 411 IPR005804 GO:0006629
Lja5g2992 452 PIRSF FA_sphingolip_des 1 439 IPR012171 GO:0016491
Lja5g2992 452 PANTHER FATTY ACID DESATURASE 2 9 451 IPR012171 GO:0016491
Lja5g2992 452 SMART Cyt_b5_2 13 85 IPR001199 -
Lja5g2992 452 Pfam Cytochrome b5-like Heme/Steroid binding domain 14 74 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2992 Lja-Chr5 58680750 58682626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2992 1 452 Lipid Metabolism Gene Families AT3G61580 65.265 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2992 K21737 - ini:109158372 737.258