Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2991 ATGAGCGATTCTCGTTCACAAAGGAGGATCACAGTGCGAAACCACCATGGAGAAAACCTTGTCGGAATCTTACATGATGCAGCTTCAACTGCACTTGTTGTCGTGTGCCACGGTTTCCAATCTTCCAAGGAAAAGATCCCAATGGTGAACCTTGCTGCTGCTCTGGAGAAAGATGGAATCAGTGCTTTCCGCTTCGACTTTGCTGGAAATGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTATTACAGAGAAGTTGAGGACCTGCGAGCTGTAGTTCAACACTTCCGTGAGGAGAAATATGTAACTACGGCCATTGTTGGTCACAGTAAAGGGGGTAATGTGGTGCTCTTATATGCCTCAAAATATAAGGATATTCAGACGGTTGTCAATATATCTGGTCGGTTTAATCTAGCGGGAGGCATGGAAAGTCGCTTGGGTAAAAATTTTGTTCAAAGGATCAAACAAGATGGATTTATAGATGTTAAAAATAAAAGAGGGGAGATCATGTATCGCGTTACTGAAGAAAGTTTGATGGATCGCCTAACTACTATAACACATCTTGCTTGCATATCAATTCCTCAAAATTGCAGAGTGTTAACAATTCATGGATCCATGGATCAAACTGTACCAGCAGAAGATGCTTTGGAGTTTGATAAGTTCATATCTAATCATGAACTGCGCATCATAGAAGGAGCTGATCATGAATATTCTCATCATCAAGATGAACTGACCCACTTAGTATTGGAATTTATCAAGATTCATAATGACAAAGACAAAGATACATCTTTGCAGACACGATTTGGAACAATAGATAAAACTATTCGATCACGATTCTAG 840 0.4012 MSDSRSQRRITVRNHHGENLVGILHDAASTALVVVCHGFQSSKEKIPMVNLAAALEKDGISAFRFDFAGNGESEGSFQYGNYYREVEDLRAVVQHFREEKYVTTAIVGHSKGGNVVLLYASKYKDIQTVVNISGRFNLAGGMESRLGKNFVQRIKQDGFIDVKNKRGEIMYRVTEESLMDRLTTITHLACISIPQNCRVLTIHGSMDQTVPAEDALEFDKFISNHELRIIEGADHEYSHHQDELTHLVLEFIKIHNDKDKDTSLQTRFGTIDKTIRSRF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2991 279 Pfam Serine aminopeptidase, S33 29 151 IPR022742 -
Lja5g2991 279 Gene3D alpha/beta hydrolase 3 276 IPR029058 -
Lja5g2991 279 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 259 - -
Lja5g2991 279 SUPERFAMILY alpha/beta-Hydrolases 7 253 IPR029058 -
Lja5g2991 279 PANTHER RE40534P-RELATED 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2991 Lja-Chr5 58661983 58665277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2991 31 234 Acyl Lipid Metabolism Gene Families AT2G39410 27.586 2.33e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2991 K06889 - gmx:100808881 462.225