Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2976 ATGAACAACAACGACTGGTTATCACCGATGGATTCGGATCCGTTTCACAACTTTCTCGGTTCTCATTTGCTGCGTTCGGTGGTGGAAAATTCTGGAACCACCGCGCTGGACGAGGCGTTTGGCCGCGTGTCGAGGCTCGCCGGCGCGGCGTTGTTGTGGTTCTCCGGCGGCACTAGTTCGATTGCGGCGCAGGATGTGGCGCGTTCGCTTCGCGGTGGTTGTGGTGGTGGTCTTGATCGGTTTGGTGGAGGCGTTATTTCCAATGTGAAGGTTGTAAAGGCTAATGTGGCTGCGTTTAGGTTTCCGTTTAGATCGAAGAGGAAATCTTCTTCTTCTTCTGAGCCTTTGACGTTGAGGAAGCTTACGAGTTTCGCGGCGAGGTTGCTGTGGAGAGAGGCTAAAAGGATTCAATCGTTTCCTGTTCTTTCGTTAGCTGCTGCATTGGTTCCACCCATTCAAAACTTGTCGTCAAATGTTCTTGCTGGCCAGTTGCAGAGTCCGGATGTTCAAATGCATGGTAGTATTGAGCAAGTGCCTAAGGAGGTTGAATTCCAAGGATGTCCTCGTTTATCACTTCCTGAGTTGAGCCTAGCAAAATCTGCGGTGGAGCCTAAAACTGGCATTGAGTTTCCTGTGGTTCTGGACAATTTATCAGCTGGAGATCGGAATTCCGGCTTCAGCTCCGAGGTCCTGGTTGGAACTGGATCCAAAAACATGACATTTGTTAAAATCAAGTCTCTGAAGGTCTATGCTTTTGGATTTTATGTTCATCCGTACTCCCTCTGTGAGAAATTGGGCCCAAAATATGCATCAATATCTGCTGATGAACTTGATAACCGTCATGATTTCTACCAGGATCTTCTCAGGGAGGACATCAATATGACTGTTAGGCTTGTTGTAAATTGCAAGGGTATGAAAATTAACAGCGTGAAAGATGCTTTTGAGAAATCACTTCGAGCTCGATTAGTTAAGGCAAATCCATCCACAGACTTCGATTGCCTAAGTGCATTTGGTTCATACTTTACAGAGAATTTCCCGATTCCATTGGGAACAGTTATTGAGTTCAAACGAACAGTTGATGGTCGACTGATTACTGAAATTAGTGGCCATCAAATTGGAAGCGTCCACAGCAAAGATTTGTGTCGGGCTTTCTTTGACATGTATATTGGAGATTTACCTGTGTGTGAACAAACTAAAAAAGAGATCGGCATGAATGTTGCAAATATGATTAAGAGGTGTTGA 1242 0.4557 MNNNDWLSPMDSDPFHNFLGSHLLRSVVENSGTTALDEAFGRVSRLAGAALLWFSGGTSSIAAQDVARSLRGGCGGGLDRFGGGVISNVKVVKANVAAFRFPFRSKRKSSSSSEPLTLRKLTSFAARLLWREAKRIQSFPVLSLAAALVPPIQNLSSNVLAGQLQSPDVQMHGSIEQVPKEVEFQGCPRLSLPELSLAKSAVEPKTGIEFPVVLDNLSAGDRNSGFSSEVLVGTGSKNMTFVKIKSLKVYAFGFYVHPYSLCEKLGPKYASISADELDNRHDFYQDLLREDINMTVRLVVNCKGMKINSVKDAFEKSLRARLVKANPSTDFDCLSAFGSYFTENFPIPLGTVIEFKRTVDGRLITEISGHQIGSVHSKDLCRAFFDMYIGDLPVCEQTKKEIGMNVANMIKRC* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2976 413 Pfam Chalcone isomerase like 230 402 IPR016087 GO:0016872
Lja5g2976 413 Gene3D - 202 388 IPR016088 -
Lja5g2976 413 SUPERFAMILY Chalcone isomerase 203 411 IPR036298 GO:0016872
Lja5g2976 413 Gene3D - 260 402 IPR016089 -
Lja5g2976 413 PANTHER FATTY-ACID-BINDING PROTEIN 2 27 413 - -
Lja5g2976 413 PANTHER FATTY-ACID-BINDING PROTEIN 2 27 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2976 Lja-Chr5 58462935 58468468 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2976 - - gmx:100803025 530.02