Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2969 ATGAAGCTTTGGTGGCGATTTCTATGTTTCAACCTACAAGAAGAAGAGGAACAAGAAGAGGTTGTTGTGGTTCGAGAGGAAGAGCGTGAGCGTGGTAATCTTCTTCTTCTTCTTCCAGAAACTACTACTATGAATAACAACAACGACGACAACAACGGCATCGACATCGACATCGACATTCCTTCTGCTGCTTCCGACGACGACGACGCCGGAAATGACGATGCCGGCGGCGGTGGTGGTGAGGAACGGTGGTTGCTCGATGAGATTGATAGGGTTCCGCCTGTGGATGAGTTCGGAGGGTGGGAACGCATGCTGTTTTCTCAGGGAGAGAGTAGCTCTGCCGTTGCTGCGGCTTCCGCCGATGAAGAGAGTCACGATTTGAGCCATAAGCGCGCCAAGTTCTACGCTGATTTCGAGTTCGATGAGAGTCACTTTGCAACTCCAGCATCTTCCAGTGGTGGGAAATGCGCTTATGTGTCTTCTGAAAGTGGAGGTCATGATTATTTTCAAGGTTCGCCTCTTCGACTGAACAGTGGCATGGGTTATGATGCTTTTACATTAATGTGTATCGGTGGTGAGGAGGGTAACTTTGTGCAAGACGGTGAAGGAAATGATAGTGACATCTCAAACCTAGAAGATCTAGAGGTCAGGATGGACTTAACAGATGATTTGTTGCATATGGTTTTCTCATTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGAGTTTGTAAGCAGTGGCGAGCTGCTAGTGCTCATGAAGATTTCTGGAAGAGTTTGAATTTTGAGGATAGGAACATCTCTGTTGAACAATTTGAGGACATGTGTAGGCGTTATCCTAATGCCACAGCAATGAGCATATCTGGTCCTTCTATTCACTTGCTTGTCATGAAGGCTATCACTTCATTAAGGAATCTTGAGGTTTTAACATTAGGAAGAGGACAGATAGCGGATTCTTTTTTTCTTGCTTTACCTGATTGTTCAATGTTGAGAAGTTTGAATATCAATGATGCTACACTTGGAAATGGTATTCAGGAGATATCTGTTGTTCATGAAAGATTGTGTCAACTTCAATTAACAAAATGCCGTGTGATGCGAATAGCCGTCAGGTGCCCACTGCTTGAAACTATGTCATTGAAGCGCAGTAACATGGCACAGGTTGTGCTTAACTGCCCTCTTCTGCATGAGCTTGATATAGGCTCTTGCCACAAACTTCCAGATGCTGCGATCCGTGCTGCTGCAACTTCATGTCCTCAACTAGTGTCACTGGACATGTCTAATTGTTCATGTGTCAGTGATGAAACACTGCGTGAAATAGCACAAAATTGTGCTAACCTTAGTGTTCTTGATGCATCATACTGCCCAAACATATCTTTGGAGAATGTTAGACTTCCAATGTTGACAGTTCTAAAGCTTCATAGTTGCGAGGGCATCACTTCCGCCTCAATGGCTGCAATAGCTCATAGTTCCATGCTTGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCAGTGTCTTTGGATCTTCAACGTTTAACGAATATAAGATTGGTACACTGTCGCAAATTTGCTGATTTGAACTTGAGGGCCATAATGCTTACTTCTATACTGGTGTCTAACTGCCCTGCTCTCCACCGTATTAACATCACTTCAAATTCACTTCAAAAATTAGCATTGCAAAAGCAGGATAGCTTAACGGTGTTGGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTTTCCGAGTGTGAATCTTTGACGAACTCTATATGTGAAGTGTTTAGTGACGGTGGAGGATGCCCTATGTTGAAATCACTAGTTCTTGATAATTGTGAGAGCTTGACCTCAGTTCGGTTCGTCAGCACCTCTTTAGTCAGTCTTTCTCTTGGTGGTTGTCGCGCAATTACTACTCTTGAGCTAACATGCCCTAATCTCGAGAAAGTCATTTTGGATGGCTGCGATCATTTGGAAAAAGCATCATTTTGTCCGGTTGGTCTTCGGTCTCTCAATTTAGGAATATGTCCAAAATTGAACGTACTGAGCATTGAAGCATTATATATGGTCTCACTCGAGTTGAAAGGATGCGGCGTGCTATCTGAAGCTTCCCTTAATTGTCCTTCCTTGACGTCTCTAGATGCTTCTTTTTGCAGCCAACTCACTGATGACTGCTTGTCTGCGACAACAGCGTCATGCAAATTGATTGAGTCATTAATATTAATGTCATGCCCATCAATTGGTTTAGATGGACTTTGCTCTCTGCGTTGGCTCCCAAATTTGACTCTGCTTGATTTATCATACACTTTCTTGGTGAATCTGCAGCCTGTTTTTGAATCTTGTCCACAGTTGAAGGTATTAAAGTTGCAGGCATGCAAATATCTCACTGACTCATCACTTGAACCTCTATACAATGGGGGTGCTTTACCAGCTCTTGAGGAGTTAGACTTGTCTTATGGAACTCTGTGTCAGTCTGCAATCGAAGAGCTTCTTTCTTGCTGCACACACCTTACTCGTGTGAGCTTGAATGGCTGTGTGAATATGCATGATTTAAACTGGGGGTATAGTCGTGGGAAGATTCCTGAGTTGCCTGGCATAAATATCCTGTCCATTGCAAGCTCCCACAACAATTTCCATGAGCCAAGTGAGCAACCTACCCGATTACTGCAGAACCTCAACTGTGTAGGATGTCCAAATATCAGGAAGGTTTTCATTCCATCAACAGCACATTGTTCCAATTTATTGTTTTTAAACCTCTCTCTGTCAGCTAATTTGAAAGAGGTTGATGTAGCTTGTCTCAACCTGTGCTGGCTTAATTTAAGCAATTGTTCCTCTTTGGAAGTTTTGAAGCTTGAGTGTCCAAGATTGACCAGTCTGTTCCTTCAGTCTTGCAATACTGATGAGGAAACTGTTGAAGCTGCTATATCTAAATGCACTATGCTGGAAACTCTTGATGTTCGCTGTTGTCCTAAGATAAGCTCTATGAGCATGGGAAGATTTCGTGCAGCGTGTTGTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTTCATGA 3051 0.4326 MKLWWRFLCFNLQEEEEQEEVVVVREEERERGNLLLLLPETTTMNNNNDDNNGIDIDIDIPSAASDDDDAGNDDAGGGGGEERWLLDEIDRVPPVDEFGGWERMLFSQGESSSAVAAASADEESHDLSHKRAKFYADFEFDESHFATPASSSGGKCAYVSSESGGHDYFQGSPLRLNSGMGYDAFTLMCIGGEEGNFVQDGEGNDSDISNLEDLEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRAASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAMSISGPSIHLLVMKAITSLRNLEVLTLGRGQIADSFFLALPDCSMLRSLNINDATLGNGIQEISVVHERLCQLQLTKCRVMRIAVRCPLLETMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLVSLDMSNCSCVSDETLREIAQNCANLSVLDASYCPNISLENVRLPMLTVLKLHSCEGITSASMAAIAHSSMLEVLELDNCSLLTSVSLDLQRLTNIRLVHCRKFADLNLRAIMLTSILVSNCPALHRINITSNSLQKLALQKQDSLTVLALQCQSLQEVDLSECESLTNSICEVFSDGGGCPMLKSLVLDNCESLTSVRFVSTSLVSLSLGGCRAITTLELTCPNLEKVILDGCDHLEKASFCPVGLRSLNLGICPKLNVLSIEALYMVSLELKGCGVLSEASLNCPSLTSLDASFCSQLTDDCLSATTASCKLIESLILMSCPSIGLDGLCSLRWLPNLTLLDLSYTFLVNLQPVFESCPQLKVLKLQACKYLTDSSLEPLYNGGALPALEELDLSYGTLCQSAIEELLSCCTHLTRVSLNGCVNMHDLNWGYSRGKIPELPGINILSIASSHNNFHEPSEQPTRLLQNLNCVGCPNIRKVFIPSTAHCSNLLFLNLSLSANLKEVDVACLNLCWLNLSNCSSLEVLKLECPRLTSLFLQSCNTDEETVEAAISKCTMLETLDVRCCPKISSMSMGRFRAACCSLKRIFSSLSTS* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2969 1016 MobiDBLite consensus disorder prediction 46 83 - -
Lja5g2969 1016 PANTHER OS10G0396666 PROTEIN 121 977 IPR044703 GO:0010252|GO:1905393
Lja5g2969 1016 PANTHER OS10G0396666 PROTEIN 121 977 - -
Lja5g2969 1016 MobiDBLite consensus disorder prediction 61 75 - -
Lja5g2969 1016 Pfam F-box-like 222 262 IPR001810 GO:0005515
Lja5g2969 1016 Gene3D Ribonuclease Inhibitor 774 863 IPR032675 -
Lja5g2969 1016 SUPERFAMILY F-box domain 217 268 IPR036047 GO:0005515
Lja5g2969 1016 ProSiteProfiles F-box domain profile. 214 260 IPR001810 GO:0005515
Lja5g2969 1016 Gene3D Ribonuclease Inhibitor 212 461 IPR032675 -
Lja5g2969 1016 Gene3D Ribonuclease Inhibitor 865 1014 IPR032675 -
Lja5g2969 1016 Gene3D Ribonuclease Inhibitor 624 773 IPR032675 -
Lja5g2969 1016 Gene3D Ribonuclease Inhibitor 462 623 IPR032675 -
Lja5g2969 1016 SUPERFAMILY L domain-like 643 995 - -
Lja5g2969 1016 SUPERFAMILY L domain-like 299 718 - -
Lja5g2969 1016 SMART fbox_2 220 260 IPR001810 GO:0005515
Lja5g2969 1016 SMART LRR_CC_2 417 442 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 573 598 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 833 873 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 977 1009 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 952 976 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 391 416 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 780 805 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 706 731 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 601 631 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 643 668 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 464 489 IPR006553 -
Lja5g2969 1016 SMART LRR_CC_2 732 757 IPR006553 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2969 - - gmx:100782842 1494.95