Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2947 ATGGCAACCTCCGCCGCCATCGGCGGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGCGGTGAACGCCGGAGCATCGAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTTTTCTACCTCGCCCTCTCTGATATGCTTTGCAGTTTCTTCAACGTAATAGGGGACCCATCCCAAGGTTTCTTTTGTTATGCTCAGGGATATAGCACACATTTCTTTTGTGTGGCGTCTTTCCTATGGACTACAACTATTGCATTTACCCTACACCGTACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTTTGGGGTACATCCCTTGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAAGCATTTTGGTGCCTGGTGTTGGACTCAAACAGGTCGCACAGGGAAGGCAATTCATTTTATAACATTTTACATGCCACTTTGGGGTGCAATTCTATATAATGGGTTTACATACTTGCAAGTGATACGCATGCTGAATAACGCAACCCGTATGGCAGTTGGCATGTCAGGTCAAGCTTATGTCTCAGATACAAGAGATAACATGAGGGCTCTGAATCGCTGGGGATACTATCCACTAATTCTAATAGGATCTTGGGCTTTTGGCACTATTAACCGTATTCATGATTTTTTTGACCCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATGTTGGAACCGCTGCTCTAATGGGGCTCTTTAACTCAATTGCATATGGCCTCAATTCTTCTGTTCGACGAGCAATTTGTGAAAGACTGGACAAGTGCTGGCCAGAGAGACTATACAGATGGCTCCCTAACAAATTTAAGTACAAGAACCTACAACAGGAAAGTGAACTAGTTTCGTTTCAAACTGAAGGTCAGCGATAG 960 0.4531 MATSAAIGGALTAHDRWILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFNVIGDPSQGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAIHFITFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDFFDPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKCWPERLYRWLPNKFKYKNLQQESELVSFQTEGQR* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2947 319 Pfam Slime mold cyclic AMP receptor 28 273 - -
Lja5g2947 319 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Lja5g2947 319 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Lja5g2947 319 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Lja5g2947 319 PRINTS GCR1-cAMP receptor family signature 221 239 IPR022343 -
Lja5g2947 319 PRINTS GCR1-cAMP receptor family signature 253 272 IPR022343 -
Lja5g2947 319 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 273 IPR017981 GO:0004888|GO:0007166|GO:0016021
Lja5g2947 319 Gene3D - 14 295 - -
Lja5g2947 319 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 304 - -
Lja5g2947 319 PANTHER TRANSMEMBRANE PROTEIN 116 10 304 - -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 159 171 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 172 195 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 215 236 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 245 262 IPR022340 -
Lja5g2947 319 PRINTS Putative plant GPCR, GCR1, signature 263 279 IPR022340 -
Lja5g2947 319 SUPERFAMILY Family A G protein-coupled receptor-like 16 290 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2947 K22987 - gmx:100794547 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2947 5 57955856 57962600 Lja5g2947 5 57955856 57962600 ECH