Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2939 ATGGAAATGGCAACCTCTTCCTTCATCCTAGGTTCAAATTTCAAGTGCATGTTCTCTTCGAAGAATACTAAAATTCTGTCTGGTTTTGGTGGATTCAAACACCCATACCCACATGGGTTATTCAGCAAAAGCTTCCATTTTTACACACTGTCTCCTAGAATGGTGGCAGGGAGAACAAAGATGGTTTCTAATGTGTATGTTGGCAGGGACACAAGTATCAGAATCAGTAGCAAGATGTTCACCGAATTGGATTCTTGTCTGGTGATACCACCTACACCCTATCGTGCCAAGCCAAGGGCTATAGTCAAATTCCTCGGTGGTGCCTTCATTGGTGCTGTTCCTGAAGTTACCTATGGGTACCTAATAGAGTGTTTGGCAAAGGAAGGTTTTCTTGTTGTGGTGGTGCCTTACAATGTGACATTTGACCATGCTCAAGCTGCTAAACAAGTGTATGAGAAGTTTCACACTTGTTTGGATACACTCCTTACATCTGGGTTGCCTCAAGCCAATTTGTCACCTGCTCAGCTTGGAGACCTTCCTCTTTTCTGTGTTGGTCATAGCAATGGTGCACTTCTTCAACTACTCACAGGAAGCTTATTTTCTGAGAAATTACCCAAGGCTAATGCCATAATCGCATACAACAATAGGCCAGCAACGGAGGCAGTCCCTTACTTTGAGCAGTTGGGTCCTGCAGTCAGCCAGATGATGCCGGTTATGGAAACAAATCCTGTTTATTCAATAGCTAGAAATGCATCAGGAGACGCGTGGAAGATGATGCTGGATTCTTTTGGATCAATTATACAGGAAAGCGAGCAAGAACTTCTGAATTCCTTAACTAAATTTGTTGATCAGTTACCATCAGTAATGAATGAGATTACACAAGGAGTATCCGAGTTCAAGCCAACACCATCTGAGAACCGTGATTGCTTCAAATGTTCATACAATGTTGAAAATACATTATTGGTGAAATTCAATTCTGACGCAATTGATGAGACAGACATTCTTGAAGAAACACTTAAACCTCGTGTGGAGTCTTTTGGTGGGACATTGGAAAAAGTACTACTTAATGGTAACCACATTACAGCTTGCATTCAGGAACCAAGATGGCAAGTGGGTAAATTGTATACTCCAGCAGATGCTGTTGCTCAAGTGCTTAAATCTCTTTCTTTGAGTGATACTAGAATCCTTGCCAGAACCATTAGCGACTGGTTCAGACGTTTTGAAGATTGA 1230 0.4187 MEMATSSFILGSNFKCMFSSKNTKILSGFGGFKHPYPHGLFSKSFHFYTLSPRMVAGRTKMVSNVYVGRDTSIRISSKMFTELDSCLVIPPTPYRAKPRAIVKFLGGAFIGAVPEVTYGYLIECLAKEGFLVVVVPYNVTFDHAQAAKQVYEKFHTCLDTLLTSGLPQANLSPAQLGDLPLFCVGHSNGALLQLLTGSLFSEKLPKANAIIAYNNRPATEAVPYFEQLGPAVSQMMPVMETNPVYSIARNASGDAWKMMLDSFGSIIQESEQELLNSLTKFVDQLPSVMNEITQGVSEFKPTPSENRDCFKCSYNVENTLLVKFNSDAIDETDILEETLKPRVESFGGTLEKVLLNGNHITACIQEPRWQVGKLYTPADAVAQVLKSLSLSDTRILARTISDWFRRFED* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2939 409 PANTHER INITIATION FACTOR 4F SUBUNIT (DUF1350) 59 407 - -
Lja5g2939 409 Gene3D alpha/beta hydrolase 67 284 IPR029058 -
Lja5g2939 409 PANTHER OS04G0405600 PROTEIN 59 407 IPR010765 -
Lja5g2939 409 Pfam Protein of unknown function (DUF1350) 96 404 IPR010765 -
Lja5g2939 409 SUPERFAMILY alpha/beta-Hydrolases 86 204 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2939 - - gmx:100799131 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2939 5 57810571 57815341 Lja5g2939 5 57810571 57815341 ECH