Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2927 ATGGGGTATGAATACAATCAAGCCACAGACGGGCTTATGAAGCTATTCACAAAAGCCAATCACGATCTCGCTATGGTTCACCACCGTCTCGAAAAGGAGTTTCAACAGGTTTACCCTGACAACGCAAACCCTATGAAGCTGGTTTCAAGGATCAAAAAGGTGCAGGAAGATATATCAACCTTGAAGGGACAGTGCCATGAGCTTCTGGCTGCAAAGCAGGATTTGATAGATAAGGCTCAGATAACTCTGGTTGAGAACAGAAATTCGCTGCAGCGTATGCAAGCATCTGTGGGCATCCCTGTAACTGGTGAAGATGATGCTGCATTCACTAACTTCAAACAGGTAATTGAAGAATGGACAGCTCAAGTAAGATCCAAAACAGGAGATGAAACACATGATTCTGATTCTGGAGATATCAACAAACTGCTCTTCTCAGCCATAGTTCAAAGTAATTGA 456 0.432 MGYEYNQATDGLMKLFTKANHDLAMVHHRLEKEFQQVYPDNANPMKLVSRIKKVQEDISTLKGQCHELLAAKQDLIDKAQITLVENRNSLQRMQASVGIPVTGEDDAAFTNFKQVIEEWTAQVRSKTGDETHDSDSGDINKLLFSAIVQSN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2927 151 PANTHER SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2 7 151 IPR026762 GO:0000940|GO:0005876|GO:0007059|GO:0008017|GO:0051301
Lja5g2927 151 Coils Coil 51 71 - -
Lja5g2927 151 Pfam Spindle and kinetochore-associated protein 2 7 112 IPR042091 -
Lja5g2927 151 Gene3D - 5 119 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2927 K26095 - gmx:100500198 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2927 5 57626412 57629561 Lja5g2927 5 57626412 57629561 ECH