Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2924 ATGCATAACCCTGTTACTACTCGAGAACCCAGTTCAGTTCTCGATTTAGGGTCCCAAATCCGTCGTTTCACTCTCGATTCGACGTTTTTGAACCCTAGCTCCGACACGTGCTCCTCCGTGCTCTCCAATTTCCTCTACTTCAACAACACCACCACTGTCGCTCGGGGAGCCAAACGCGGCGTTTCGGTGAGCTTGCGCGCTGGAGGGTTACCGTTCCGGAGGATTCTCCATGACTTCAACAGTGCTGTCAGGTTCCACTGTGAGAGAATCCCCATCGGGTTCGCGTCGCTGCGGGTCGGTGAGGGTGATGGTAACGGTGGCGGTGACGGAGTGGGTTCCGGTGCCGGTGATGGGAACGGGGTTGGAGAGGGTGGGCGCGGTGTTGTGGAGGATGAGAGAGGGCAGTTGAGTGGTGCTGACGGTGACCGTCCTAAGAAGGTTCTGATTTTGATGAGTGATACTGGTGGTGGTCATCGAGCTTCTGCTGAAGCTATCAAAGCTGCGTTCTATGAAGAATTTGGCGATGGTTACCAGGTGTTTGTAACTGATTTATGGACTGAACATACGCCTTGGCCATTCAATCAACTCCCCAAGAGCTATAGCTTTTTGGTGAAACATGGGCCATTGTGGAAGATGGCATACTATTCCACTGCCCCACGTTTAGTGCATCAGTCTAATTTTGCGGCAACTTCAACATTCATTGCTCGTGAAGTTTTTAGAGGGTTAATGAAATATCAGCCAGATATAATAATCAGTGTGCATCCACTGATGCAACATGTTCCACTTCGTATTTTGAGGGCCAAGGGTCTCTTAAAGAAGATTGTTTTTACCACAGTCATCACTGATTTAAGCACATGCCATCCAACATGGTTTCATAAGCTTGTAACTAGATGCTATTGTCCAACAGCTGACGTTGCCAAAAGGGCACTGAAAGCTGGACTCCAGCAATCCCAAATAAAGATTTATGGCTTACCTGTTCGACCTTCCTTTGTTAAGCCTGTTCGAGCAAAGGATGAACTAAAGAGAGATTTAGGGATGGATGAGGATCTTCCTGCTGTATTATTGATGGGGGGAGGTGAAGGTATGGGCCCCATTGAGGCCACTGCTCGTGCACTTGGAAATTCATTGTATGACGAGAATCTAGGGGCTCCTGTTGGTCAGATCCTTGTGATCTGTGGTCGCAATAAGAAGCTTGCTAACAAACTCAACTCTATTAAGTGGAAGATTCCTGTGCAGGTCAAGGGTTTTGTTACCAAAATGGAGGAATGTATGGGAGCTTGTGATTGCATCATTACAAAGGCGGGACCTGGGACAATTGCAGAGGCCATGATCCGAGGCCTTCCTATTATCTTGAATGATTACATTGCGGGGCAGGAAGCTGGCAATGTTCCCTATGTAGTTGAAAATGGTTGTGGGAAGTTCTCTAAATCGCCTAAGGAGATAGCTAAAATTGTCGCGGATTGGTTTGGTCCAAAAGCTCATGAACTAACAGTAATGTCACAAAATGCATTGAAGTTAGCAAGGCCAGATGCAGTAGTCAAGATAGTACATGACCTTGACGAGCTTGTAAGGCAAAGAAGCTACTTACCAGAGTATTCTTGTATAGCTTAA 1611 0.4718 MHNPVTTREPSSVLDLGSQIRRFTLDSTFLNPSSDTCSSVLSNFLYFNNTTTVARGAKRGVSVSLRAGGLPFRRILHDFNSAVRFHCERIPIGFASLRVGEGDGNGGGDGVGSGAGDGNGVGEGGRGVVEDERGQLSGADGDRPKKVLILMSDTGGGHRASAEAIKAAFYEEFGDGYQVFVTDLWTEHTPWPFNQLPKSYSFLVKHGPLWKMAYYSTAPRLVHQSNFAATSTFIAREVFRGLMKYQPDIIISVHPLMQHVPLRILRAKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPTADVAKRALKAGLQQSQIKIYGLPVRPSFVKPVRAKDELKRDLGMDEDLPAVLLMGGGEGMGPIEATARALGNSLYDENLGAPVGQILVICGRNKKLANKLNSIKWKIPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKSPKEIAKIVADWFGPKAHELTVMSQNALKLARPDAVVKIVHDLDELVRQRSYLPEYSCIA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2924 536 MobiDBLite consensus disorder prediction 105 141 - -
Lja5g2924 536 Pfam Glycosyltransferase family 28 C-terminal domain 386 451 IPR007235 GO:0016758
Lja5g2924 536 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 145 522 - -
Lja5g2924 536 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 158 326 IPR009695 GO:0009247|GO:0016758
Lja5g2924 536 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 87 526 - -
Lja5g2924 536 MobiDBLite consensus disorder prediction 126 140 - -
Lja5g2924 536 Gene3D Glycogen Phosphorylase B; 335 507 - -
Lja5g2924 536 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 87 526 - -
Lja5g2924 536 CDD GT28_Beta-DGS-like 147 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2924 Lja-Chr5 57586311 57591731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2924 1 536 Glycosyltransferase AT4G31780 67.075 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2924 K03715 - gmx:547469 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2924 5 57586311 57591731 Lja5g2924 5 57586311 57591731 ECH