Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2895 ATGCAGGAGGAGGAAAATCAAGAAGACCCATTTGTTGAATCTGTGGAGGAAAATGAAAATGAACCCAAAAGAAGGGTTTGGAACTGTCTTTGTATTCCTATCCACTGGTTTAACATGCTTTCAAGGGAAATGCATTGGAGCTTTGTGTTTGGAGTGGTAGTTGTTTATGGAATAAGCCAAGGAGTGGGTGGAGCTTTTGCCACTGTTGGCACAAAGTATTACATGAAAGATGTTCAGAAGGTGCAGCCATCTGAAGCACAGGTTTATTCAGGAATTACATCAATTCCTTGGATTGTCAAACCTCTTTGGGGTCTTCTCACTGATGTTGTCCCAATTTTTGGATTTCGGAGGCGCCCATATTTCATTTTTGCTGGTTTTGTAGGGGTGATTTCCATGCTTTTGTTATCTTTGCATGAGAACCTGCATCTTGTGTTGGCCCTTTTGTCATTAACAGCTGGGAGTGCCGGCGTGGCAATAGCAGATGTCACCATTGATGCCTGTGTGGCACAGAACAGTATCTCTCATCCTTCACTTGCCGCTGACATGCAAAGTTTGTGTGCCTTTAGTTCTTCTGTTGGAGCACTATTAGGATTCTCCATTAGTGGTATCTTTGTTCACCTTATAGGACCTATGGGGGTGTTTGGTTTGATGACTATCCCAGCTGGACTTGTAATTTTGGTTGGTTTTCTTCTCAATGAGCCTCGTATGCACAACTTTTCTTGCAAAGAGGTTAACCGGAATTGTCTTGATGCTGGCAAGTCTATGTGGAATACATTGAAGAGTGAAGATGTATGGAGGCCTTGCTTATACATGTATTTATCCCTTGCATTGAGTTTAAATATCTTTGAAGGAATGTTTTATTGGGCTACAGACTCAAAGGATGGACCAGCTTTCTCTCAGGAGAGTATTGGCTTCATATTTTCAATTTGTTCAGTGGGCTCCCTTTTAGGTGCAATACTATACCAGTATGCTCTAAAGGATTACGCGTTCAGAGACGTGCTCTTCTGGACTCAGTTGCTTTACGGTTTGTCAGGGATGTTTGATCTGATTCTAGTCCTGAGATGGAACCTGAAATTTGGTATACCAGATTACTTCTTTGTTGTGGTTGTGGAAAGCATAGCTCAAATGACTAGTAGGCTCAAGTGGATGCCTATGCTTGTACTCAGCACAAAGCTTTGCCCTTCAGGTATTGAAGGCACTTTCTTTGCTCTCCTAATGTCAATTGATAATCTTGGAGTTCTCTCAGCATCATGGGGAGGAGGATTAGTGCTCCACGTTCTGAAGATTACAAGAACACGGTTTGATAATCTTTGGTTGGCTATTTTGATCCGGAACGTTCTGAGAATCACTCCACTTTGCTTGCTGTTTTTGGTGCCTAGAGCTGATCCTAACTCTTCTATTCTTCCGAGCGAAATCGCGAATTCAAAGGTTGCTGTTGACACTTCAGAAACCATAGATGTTGAATTGGTTTCCCTTGTACACAGTGTTGATGGTAAATAG 1500 0.422 MQEEENQEDPFVESVEENENEPKRRVWNCLCIPIHWFNMLSREMHWSFVFGVVVVYGISQGVGGAFATVGTKYYMKDVQKVQPSEAQVYSGITSIPWIVKPLWGLLTDVVPIFGFRRRPYFIFAGFVGVISMLLLSLHENLHLVLALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFSISGIFVHLIGPMGVFGLMTIPAGLVILVGFLLNEPRMHNFSCKEVNRNCLDAGKSMWNTLKSEDVWRPCLYMYLSLALSLNIFEGMFYWATDSKDGPAFSQESIGFIFSICSVGSLLGAILYQYALKDYAFRDVLFWTQLLYGLSGMFDLILVLRWNLKFGIPDYFFVVVVESIAQMTSRLKWMPMLVLSTKLCPSGIEGTFFALLMSIDNLGVLSASWGGGLVLHVLKITRTRFDNLWLAILIRNVLRITPLCLLFLVPRADPNSSILPSEIANSKVAVDTSETIDVELVSLVHSVDGK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2895 499 CDD MFS_FBT 58 456 - -
Lja5g2895 499 SUPERFAMILY MFS general substrate transporter 49 459 IPR036259 -
Lja5g2895 499 Pfam BT1 family 269 461 IPR039309 -
Lja5g2895 499 Pfam BT1 family 60 232 IPR039309 -
Lja5g2895 499 TIGRFAM fbt: folate/biopterin transporter 44 464 IPR004324 GO:0016021
Lja5g2895 499 Gene3D MFS general substrate transporter like domains 32 446 IPR036259 -
Lja5g2895 499 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 12 498 - -
Lja5g2895 499 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 12 498 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2895 Lja-Chr5 56894192 56898000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2895 - - ccaj:109816000 836.639