Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2882 ATGGCTTCCCTCATTCGAGTGGTTCGAAAGAAAATCAGTAGTAGCTGTTGTTCATCTTCATGGGCGGTTGCGAGAACACTGAGAGTGAGGAACGGTACCTTGGGTTTCGCCAGCAGAGGTTACGCAGAAGTAGCAGCGGTTAAATCTCCATTTGAATCCAACATTTTACGAGTTCTCCGGAACGAGATCGAGTACCAGGCCGAGTACGCTCCTCCACACCAGCCTGAGACGAAATTCAATTCGTATACGGTTGAAGAGCGACCTGGAGAGCAGGTGATTACATTGAAGGGGAGGTTTGGGGACAGGGAAGATATCAAAATCGAAGCTACTATGTTTGATGGGTATGAGCACATTACGGTGCCTGGAGATGACAGTTCTGGGGCAGATGTGCGACTTCACCTCAGTCTACTGGTGGATATATCCAAGGGGGAAGGTGGCAGTGAATTGGAATTTGTCTGCTCAGCATGGCCAGATTGTTTAGATGTTGAGAAAGTTTACATATTAAGGCGTGGTCATATGCCAACTAGGCCTTTCCTGGGACCTAATTTCAGGGACCTGAATCCTAAGGTTCAGGAAAAGTTTCGTGAGTACTTGGACACAAGGGGAGTAAATGATGAACTAGCTGCTTTCTTACATGATTATATGCTGAACAAGGATAGAATTGAGCTTCTACGGTGGATGGATAGCCTCAAGTCTTTTGTGGAAAAATAG 711 0.4627 MASLIRVVRKKISSSCCSSSWAVARTLRVRNGTLGFASRGYAEVAAVKSPFESNILRVLRNEIEYQAEYAPPHQPETKFNSYTVEERPGEQVITLKGRFGDREDIKIEATMFDGYEHITVPGDDSSGADVRLHLSLLVDISKGEGGSELEFVCSAWPDCLDVEKVYILRRGHMPTRPFLGPNFRDLNPKVQEKFREYLDTRGVNDELAAFLHDYMLNKDRIELLRWMDSLKSFVEK* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2882 236 PANTHER COMPLEMENT COMPONENT 1 1 236 IPR003428 GO:0005759
Lja5g2882 236 Gene3D Mitochondrial glycoprotein 51 234 IPR036561 -
Lja5g2882 236 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 51 235 IPR036561 -
Lja5g2882 236 PANTHER BNAA03G51840D PROTEIN 1 236 - -
Lja5g2882 236 Pfam Mitochondrial glycoprotein 60 234 IPR003428 GO:0005759
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2882 Lja-Chr5 56686691 56689864 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2882 K15414 - gmx:100786969 317.005