Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2872 ATGGAACCGGAAGTAAGCATCGAGGGATCATCGGTGATCCAAGTCGCGGTGGTTCCGATCGGGACAGTACCGCCGAACATGCTGCGTGACTATTACTCGATGCTGCTCCCACTGCACTCGATCCCGCTCTCCGCGATCAGTTCCTTCTACACGGAGCACCAGAAATCGCCGTTCGCGAATCAGCCCTGGGACACCGGTTCGCTCAGCTTCAAATTCGTCCTCGGCGGCGCTCCGCCGAGTCCCTGGGAGGATTTCCAGTCCTACCGGAAAACCCTCGCTGTTGTTGGCATTGTTCACTGCCCTTCCTCGCCGGATCTCGACGCCGTTGTTGATCAGTTTGCTAGCGCCTGCAAGTCTTACCCTTCGTCTCTCGTCGATCGCTGCTTCGCCTTCTGCCCCAATGATTCTCAGCTTGATGATGGAAGTAAGAGAGAGGGGAATTTGAGGTTGTTTCCTCCAGCGGATCGTCCGACATTGGAATTTCACTTGAACACTATGATGCAAGAAGTAGCTGCTTCGCTGCTTATGGAGTTTGAGAAATGGGTGCTTCAGGCGGAATCTTCTGGAACAATTCTCAAGACGCCTTTGGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTAATTAAGGCCAAAAAGAGGAGACTTGGGCGTGCTCAGAAGACCATTGGTGATTACTGCTTGCTGGCAGGTTCCCCTGTTGATGCCAATGCTCATTATTCTACTGCGTTGGAACTTGCAAGATTGACTGGTGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAATCTTGGAGGACGAAGTTAGATATCGTTATAATAGTGTGATCTTGAATTACAAGAAGTCGCAAGATAATGCTCAGAGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTTTGCAGGAGAGAGCTGGCGAAGGAGGTGGTGGAGTTGTTGACAACTGCTGCTGATGGTGCTAAATGTTTAATTGATGCAAGTGATAGACTCGTATTATATATTGAAATAGCTCGTTTGTATGGCAGTCTTGGATACCAGAGAAAAGCTGCTTTCTTTTCAAGGCAGGTTGCTCAGTTATATCTGCAGCAGGATAACAGGCTAGCGGCAATTAGTGCTATGCAAGTTTTAGCTATGACCACAAAAGCTTATCATGTGCAAAGTAGATCATCAATCTCCGATCATTCCATGCATAATAAGGGAATTGGATCAAATAATGCTGATAGTGGGAAAATGTATCATCAATCAGTAGTCTCACTATTTGAGTCTCAATGGAGTACCCTCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGTGATCCTCTAACTGCATGGAGCGCAGCGGCGCGGCTTCTTAGATCCTACTATCCTCTAATACCTCCTGCTGGGCAACATGGCCTTGCTAATGCACTTTTAAATTCCGCTGAGAGGCTGCCACCAGGGACTCGTTGTGCTGATCCTGCTCTTCCTTTTATAAGGCTGCATTCCTTTCCTCTCCACCCAATCCAAATGGACATTGTAAAACGTAATCCAGCTAGAGAAGACTGGTGGGCAGGTTCTGCTCCTTCAGGCCCTTTCATTTATACACCATTTAGTAAAGGAGAGCCAAATAATATGAAGAAGCAAGAGCTTATCTGGGTTGTTGGGGAGCCTGTCCAGGTCTTGGTGGAATTGGCAAACCCTTGTGGCTTTGATTTAAGGGTTGACAGCATCTATCTATCTGTCCATTCAGGAAATTTCGATGCTTTCCCTGTGAGTGTAAGCCTTTTACCAAATTCTTCAAAAGTAATAACCTTATCAGGCATTCCAACATCAGTGGGGACAGTTACAATTCCTGGATGCATTGTTCATTGTTTTGGCGTTATTACTGAACACCTGTTTAGAGAGGTTGACAATCTGCTCCTTGGGGCTGCACAAGGGCTTGTCCTTTCTGATCCCTTTCGATGCTGTGGATCTCCAAAGTTGAAGAATGTATCTGTCCCAAATATTTCTGTGGTCCAACCACTTCCATTGTTAATATCACATGTTGTTGGAGGTGATGGTGCCATCATTTTGTATGAAGGTGAAATTCGTGATGTGTGGATTAGCCTTGCTAATGCAGGCACTGTTCAAATTGAGCAGGCACATATTTCACTGTCAGGGAAAAATCAAGATTCTGTAATTTCATATTCTTCTGAGACTTTAAAATCTTGCCTCCCTCTAAAGCCTGGAGCAGAAGTGACGTTCCCTGTGACCTTGAGAGCCTGGCAGGTTGGCTCGGTGGATACTGATACTGGTGTAGGGAGGACTGTCTCAGGAAGCAATATGAGGCATTCCAAAGATGGAAGCGACCCATCACTGTTGATCCACTATGCTGGTCCACTGAAAACCTCTGAAGAACCTCTAACAAATGGATCAACTGTTCCTCCTGGAAGACGCCTTATAGTTCCCCTTCAGATTTGTGTTTTGCAGGGTTTATCTTTTGTAAAGGCTCAGCTGCTTTCAATGGAATTTCCTGCTCATGTTGGTGAAAATCTTCCTAAGTTGGATGATATGGATAATAAGTCCCCTGGAGAACATGTTAAGTCTGAAACAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGTTGGGGACTGCGATTTCTTGAACTTGAGTTGTCAAATCCAACTGATGTTGCCTTTGAAATCAATGTCTCTGTAAAACTGGAGAATTCTAGCAATGAGGACAATCATTTAGCTGATCAGGGCGCTACAGAATATGGCTATCCCAAAACAAGAATTGATAGAGATTGCTCAGCAAGGGTTCTAGTGCCTCTTGAACATTTTAAATTACCTGTTCTTGATGATTCCTTTTTCATGAAGGACACTCGTACAGATGGAACTGGTGGGGGACGAAATACATCCTTCTCTGAAAAGAGCACCAAAGCTGAACTCAATGCTTGTATCAAGAACCTGATATCTAGGATTAAGGTTCAATGGCATTCAGGACGCAATAGCTCTGGAGAGTTAAATATCCGGGATGCTATCCAGGCAGCACTGCAGACATCAGTCATGGATGTTTTGCTGCCAGATCCACTGACATTTGGCTTCAGGCTTGTTAGAGATGGTTTTGAATCAGAAAAACTTGATTCTGATAAAGAATCTGATATAATTGAATCCCCAGCTTCCAAAGATTCTGTGCTTGCGCATGAAATGACACCAATGGAAGTTGTGGTCCGTAATAACACAAAGGATATGATCAAAATGAGTCTTAATATTACATGCAGAGATGTAGCTGGGGAAAATTGTGTGGATGGTATCAAAGCAACTGTTCTGTGGACAGGTGTTCTAAGTGATATTACTATGGAAATCCCTCCTCTGCAACAAATTAAACATTCTTTCTGCCTGCATTTTTTTGTCCCGGGAGAATATACGCTACTTGCTGCAGCAGTGATTGAGGATGCAAGTGACATCCTTAGGGCTCGTGCTAAGACCACTTCAGCTGCTGAGCCAATCTTCTGTCGTGGACCACCTTATCATGTTCGTGTCGTTGGGACTGCGTGA 3603 0.4488 MEPEVSIEGSSVIQVAVVPIGTVPPNMLRDYYSMLLPLHSIPLSAISSFYTEHQKSPFANQPWDTGSLSFKFVLGGAPPSPWEDFQSYRKTLAVVGIVHCPSSPDLDAVVDQFASACKSYPSSLVDRCFAFCPNDSQLDDGSKREGNLRLFPPADRPTLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELARLTGDYFWYAGALEGSVCALLIDRMGQKDSILEDEVRYRYNSVILNYKKSQDNAQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKCLIDASDRLVLYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQDNRLAAISAMQVLAMTTKAYHVQSRSSISDHSMHNKGIGSNNADSGKMYHQSVVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLIPPAGQHGLANALLNSAERLPPGTRCADPALPFIRLHSFPLHPIQMDIVKRNPAREDWWAGSAPSGPFIYTPFSKGEPNNMKKQELIWVVGEPVQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSVSLLPNSSKVITLSGIPTSVGTVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPNISVVQPLPLLISHVVGGDGAIILYEGEIRDVWISLANAGTVQIEQAHISLSGKNQDSVISYSSETLKSCLPLKPGAEVTFPVTLRAWQVGSVDTDTGVGRTVSGSNMRHSKDGSDPSLLIHYAGPLKTSEEPLTNGSTVPPGRRLIVPLQICVLQGLSFVKAQLLSMEFPAHVGENLPKLDDMDNKSPGEHVKSETKMDRLVKIDPFRGSWGLRFLELELSNPTDVAFEINVSVKLENSSNEDNHLADQGATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDTRTDGTGGGRNTSFSEKSTKAELNACIKNLISRIKVQWHSGRNSSGELNIRDAIQAALQTSVMDVLLPDPLTFGFRLVRDGFESEKLDSDKESDIIESPASKDSVLAHEMTPMEVVVRNNTKDMIKMSLNITCRDVAGENCVDGIKATVLWTGVLSDITMEIPPLQQIKHSFCLHFFVPGEYTLLAAAVIEDASDILRARAKTTSAAEPIFCRGPPYHVRVVGTA* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2872 1200 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1198 - -
Lja5g2872 1200 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1198 IPR013935 -
Lja5g2872 1200 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 10 190 IPR013935 -
Lja5g2872 1200 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 275 IPR013935 -
Lja5g2872 1200 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 328 742 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2872 K20306 - gmx:100784850 2197.16