Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2859 ATGGAGTCGACGTTGCCGACGACGTCGACGGTGAAACGAGGAGGGAGATCCAAGACTGTTCAGACCTCCAAACCTTCCCTCATCATGGCCTTCTTCTCTTGCGTCGCGTGGCTCTACGTCGCCGGCAGGTTATGGCAAGATGCAGAGAATCGGAACTTACTTGCTAGTCTTCTGCAGAAGCACTCATCACAGAGGCCCAAGGTGCTTACGGTGGATGATAAGCTAATGGTCCTAGGGTGCAAGGATCTGGAGAAGAGGATTGCGGAAGCTGAGATGGAATTGACACTGGCCAAGAGTCAAGGGTACCTCAAAAGCCAAGGGCTGAAAACGGTCTCTTCTTCTGACCGTAGGCTTCTTGCTGTTATTGGAGTGTATACTGGATTCGGAAGCCGATTGAAAAGAAATGTTTTCAGAGGGTCTTGGATGCCCAGAGGTGATGCCTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGTCCTAATCGAGGCGATAGTTTGGATCGCAATATTGATGAGGAAAACCGCTCGACAAAGGATTTCCTGATTCTTGAAGGACATGAGGAAGCTCAAGAAGAGTTGCCTAAAAAAGCAAAAATGTTCTTTAGTACAGCAGTTCAGAACTGGGATGCGGACTTTTATGTGAAAGTTGATGACAGTATTGACATTGATCTGGAGGGTTTAATTGAGCTTCTTGACCATCGCCGTGGTCAGGAGGGGGCATATATTGGATGCATGAAGTCAGGAGACGTGATATCGGAAGAGGGAAAGCCTTGGTATGAACCTGAATGGTGGAAGTTTGGGGATGAAAAAACGTATTTCCGACATGCGTCTGGTTCACTTGTTATACTTTCAAAGAATTTGGCACAGTACGTTAACATAAACAGTGTATCTTTGAAGACCTATGCCTATGATGATACGTCGGTGGGGTCATGGATGATGGGCGTCCAAGCAACTTATAAAGATGACAGTCGCCTTTGCTGCAGTAGTATCAGACAAGACAAGGTGTGCTCCTTGACTTGA 1038 0.4653 MESTLPTTSTVKRGGRSKTVQTSKPSLIMAFFSCVAWLYVAGRLWQDAENRNLLASLLQKHSSQRPKVLTVDDKLMVLGCKDLEKRIAEAEMELTLAKSQGYLKSQGLKTVSSSDRRLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEERGVVIRFVIGRSPNRGDSLDRNIDEENRSTKDFLILEGHEEAQEELPKKAKMFFSTAVQNWDADFYVKVDDSIDIDLEGLIELLDHRRGQEGAYIGCMKSGDVISEEGKPWYEPEWWKFGDEKTYFRHASGSLVILSKNLAQYVNINSVSLKTYAYDDTSVGSWMMGVQATYKDDSRLCCSSIRQDKVCSLT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2859 345 Coils Coil 80 100 - -
Lja5g2859 345 Pfam Domain of unknown function (DUF4094) 23 100 IPR025298 -
Lja5g2859 345 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 4 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lja5g2859 345 Gene3D - 149 333 - -
Lja5g2859 345 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 4 341 - -
Lja5g2859 345 Pfam Galactosyltransferase 133 327 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2859 Lja-Chr5 56279409 56295289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2859 76 345 Glycosyltransferase AT2G25300 80.000 3.29e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2859 K20854 - gmx:100816327 607.831