Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2855 ATGGGTTGGAGATATAGAGCTGGGTTGTTCCTCATAGCTACTGTTGTTATTATATGGGTTTCCTCTGCTGAAGTCACCCAGGATATCTTTGTAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTGTGTAACTTACTTAAACATCGCTCTTCTAAAAGTGGAAAAAATGCAGAGAGCGGGGATGAGTTTTCTGTCAGGATTGGCTCTCCTTTCAAAGGAAATGAAGCGCAGAGAAGCTTTGAAGTGGAACTGGGGAATATAATTCGAAAAGATAGCGATTTAGACTTATCAACTCTTTCAGAAGTAAAGCCATTGGTGGTCAGATATAATGACACTAATTTGCCAAAAGAAGAGAAAGCTCTTACTGCAAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCCAATGCTGCTCTTGCACGAACAAGTGTTGCCAGTACAACAGTATTATCATCTACTTCAGGACTCTTTACTCTTTTCATTGGTGTGTTAATGGGCCAAGACTCTTTAAGTATGTCAAAAGTGGTAGCTGTCTTCGTCAGCATGGTCGGGGTGGCCATGACAACTATGGGAAAAACTTGGGCTGCAGATGACTCAAAATTTAGTTCTTCCAATGGACAGCGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCAGCCGTGTCATATGGTCTATTTACAGTTCTCTTAAAAAAGTTTTCTGGTGAAGAAGGAGAACGGGTTGATGTGCAAAAGCTGTTTGGATATGTTGGACTGTTTACTCTAGTAGCTCTATGGTGGCTTATCTGGCCATTATCTGCCTTAGGAATTGAACCTAAGTTTACAATTCCTCATTCTGCTAGAGTGGATGAAGTGGTTCTTGCCAATGGATTCATTGGAAGCGTTCTCTCAGACTATTTCTGGGCACTCTGTGTTGTATGGACAACTCCCCTTGTGGCCACTTTGGGCATGTCACTCACCATTCCTCTTGCTATGTTGGCTGACATGGTGATCCACGGTCGGCATTATTCAGCATTATACATTCTTGGCTCAGTTCAGGTATTTGCAGGCTTTGTGATAGCTAATATTTCAGATTGGATGACAAAGAAGTTGGGATTATAA 1182 0.412 MGWRYRAGLFLIATVVIIWVSSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPIAFIKDWLCNLLKHRSSKSGKNAESGDEFSVRIGSPFKGNEAQRSFEVELGNIIRKDSDLDLSTLSEVKPLVVRYNDTNLPKEEKALTAKEIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDSLSMSKVVAVFVSMVGVAMTTMGKTWAADDSKFSSSNGQRSLVGDLFGLLSAVSYGLFTVLLKKFSGEEGERVDVQKLFGYVGLFTLVALWWLIWPLSALGIEPKFTIPHSARVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMVIHGRHYSALYILGSVQVFAGFVIANISDWMTKKLGL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2855 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 219 - -
Lja5g2855 393 Pfam EamA-like transporter family 138 216 IPR000620 GO:0016020|GO:0016021
Lja5g2855 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 392 - -
Lja5g2855 393 PANTHER OSJNBA0070O11.5 PROTEIN 1 392 - -
Lja5g2855 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2855 Lja-Chr5 56236751 56243125 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2855 K15289 - gmx:100792013 646.351