Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2853 ATGGCTTTCTCCTCCGCATCTCTTCGCTCTTCCTCTTATTCCTGCAGCTCACAGTTGTGGTGCTCTATAAGGTGCAATACGAAGCAGTGTAGTAGAGGAGGTTTGGTTGTCGTCGGAGGGAGAAAAGGTCGAAGTGTAGGGAATGGTGTTTGTGTTGTTAGGTCGGTGTTGAATGACAATAGGTCGAGTGTTGGTAGTTATGGAGGGGCTGAGCCTGCTAGGGTTCTTCTGGAGAGGTTGTTTGAGCAGACGCAGAAGCTGGAGAACCAGATGAGTGGTGGGGAACAGGATCTTCGGGGTTTGGAGACGGATCTTTTGGCGGCGCTAACGGCGATGAAGGAGAAGGAGGATCATTTGCAGGAAGTGGAGAGGGCTGTGGTGTTGGAGAATGGGAAGTTGAAGCAGGCGAAGGAGGAGTTGGAGAGGCAAGAGAATGAAATTGAGGCTGCTCGCACCAGGTATGAGAGGCTTGAGGAGGAGATGAAGGAGGCTACTGGTTCTTTGGTGTCTCAAGCTGGCCAGATAGAGGAACTGAAGCTCCGGCTTAGGGATCGTGATCATGAGATTGCTGATGTCCGGAATGCGCTGTTTTTGAAGGAAGAAGAAATGGAGAAAATGAGGACTGATTTGGCCAAGAAGAGTGAGGAAGCTGCTTCTGTTGATTCTGAGCTCAGACAGAAGGCTCAGCTTCTTAGTGAAGCAAATGAGGTTGTGAACAAACAAGAAGTCGAGCTTCAGGAACTGAGGAGGGCTGTCTGGGAAAGGGAAGAAGAACTCCAATTGTCTCTGGCCCTGAGGGAAACTGAAGAAGAAAAGCTCAAGGTTACAGAGGCAAATTTGGAAAAGCAGGCGATGGAGTGGATGTTAGCACAGGAAGAACTTAGGAAGCTGCGGGAGGAGGCTTCAAGACAAGCGCAGGAAAGTAGTGAAACACTGGAGGATTTCACAAGGGTAAAGAAGCTTCTCAGTGATGTGAGGTCTGAATTAGTTTCATCTCAGCAATCACTGGCATCTTCTAGATATAAAATGGAAGAACAAGAGCGTTTGTTAGAACAGCAGGCGGCAGAACTTACAGAGCAGAGGGAAAGTGTTATGTCATACATGGATAATTTAAAATATGCCCAAATAGAAGTGGAGAGTGAAAGAACAAAACTTAAGGTTGCAGAGGAATTGAACAAGGAACTTGAACGGGATCTGTCCCTCGAAAAGGAGCATATAAAGGAGTTACAAGAAGAGTTGAAGAAAGAGAGAGCTTCTTTGGAGCAGACAGTTCAAGAAGTGTCTTTGCTTCAGGAGGAATTAGAGAAAAGAAGTGCAGAATTTAGGGAAGCGAGTGCGCTTCTTCAGCTCAAAGAGTCAGAACTTGTTGATGCTAAGCTAGAAATCCAGCACTTGAAATCTGAAAAGGCTTCTCTTCAGGATCTCTTGGAGGAGAAAGACATGGAACTTTACAATGCTAGGAAGATGCTGGTGGAGGTAAGCCAGGAAATTTCTGATCTTAAGATGCTTGTGAACTGTAAAGAAACACAGCTTATTGAAGCGGCCAATATGCTCAGGGAGAAAGATGAGCACGTGAAGATCATCGAGAACAAGTTGAATAATACAAACCTGAAGGCTTTCGAGGCTGAAACTGTGGTAAAACGAATTTTAGACCTCACTAATCAACTGGTTACTTCCATTAATGATGAAGACATAAACTCACCGAGACCTCTAGATGAAATGGGTAATCAACTACTCGAGCAACTTCTGGAGGAACCTAATAATGATTTGAGGTGGCAACAAAAACGGCTTGAGAATCAACTTGAGCTGACCAAAGAAAGCTTAAAAACAAAGGAGATGGAAGTTCTTGCTGCTCAGAGGGCTCTAACAATAAAAGATGAGGAGCTTAAAATGACTCTTGCAAGATTGGATGCAAAAGAGGAAGAGTTCAAAAAAGCTAAGGTGGAGATGACAGAAGATGCTAATGATCTTCAAAGGCTGTATGCTTTTGCACAGGAGAGAATTGGTGAGAAAACTATGGGGGACTTGGCAGTTGAGAAGCTTCAGCTTGAGGCAGCTCAGCTTGAAGTTGAAGCTTGTACAAGCGCTCTGCAGAAACTTGCAGAAATGAGTCGAAAACTATTGAATACGGCGATCCTGAGTGTTGAGGCTGACAACTATATCCTGAAAAATAAGGATAGTAACCCCAACTCAATCAAAAACATCAATAACATTGATGTTTTCAGTGTGGTAAAAGCAGGAGTTGCTCGACTTTCATCTTTGACTGAACAGCTTGTGCTAGAAGCGGGTATTTCTGCTGCTGCAAACTAG 2310 0.4468 MAFSSASLRSSSYSCSSQLWCSIRCNTKQCSRGGLVVVGGRKGRSVGNGVCVVRSVLNDNRSSVGSYGGAEPARVLLERLFEQTQKLENQMSGGEQDLRGLETDLLAALTAMKEKEDHLQEVERAVVLENGKLKQAKEELERQENEIEAARTRYERLEEEMKEATGSLVSQAGQIEELKLRLRDRDHEIADVRNALFLKEEEMEKMRTDLAKKSEEAASVDSELRQKAQLLSEANEVVNKQEVELQELRRAVWEREEELQLSLALRETEEEKLKVTEANLEKQAMEWMLAQEELRKLREEASRQAQESSETLEDFTRVKKLLSDVRSELVSSQQSLASSRYKMEEQERLLEQQAAELTEQRESVMSYMDNLKYAQIEVESERTKLKVAEELNKELERDLSLEKEHIKELQEELKKERASLEQTVQEVSLLQEELEKRSAEFREASALLQLKESELVDAKLEIQHLKSEKASLQDLLEEKDMELYNARKMLVEVSQEISDLKMLVNCKETQLIEAANMLREKDEHVKIIENKLNNTNLKAFEAETVVKRILDLTNQLVTSINDEDINSPRPLDEMGNQLLEQLLEEPNNDLRWQQKRLENQLELTKESLKTKEMEVLAAQRALTIKDEELKMTLARLDAKEEEFKKAKVEMTEDANDLQRLYAFAQERIGEKTMGDLAVEKLQLEAAQLEVEACTSALQKLAEMSRKLLNTAILSVEADNYILKNKDSNPNSIKNINNIDVFSVVKAGVARLSSLTEQLVLEAGISAAAN* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2853 769 Coils Coil 266 318 - -
Lja5g2853 769 Coils Coil 629 667 - -
Lja5g2853 769 Coils Coil 587 614 - -
Lja5g2853 769 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 43 764 - -
Lja5g2853 769 Coils Coil 378 440 - -
Lja5g2853 769 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 43 764 - -
Lja5g2853 769 Coils Coil 203 223 - -
Lja5g2853 769 Coils Coil 448 482 - -
Lja5g2853 769 Coils Coil 336 363 - -
Lja5g2853 769 Coils Coil 231 258 - -
Lja5g2853 769 Coils Coil 119 195 - -
Lja5g2853 769 Coils Coil 683 703 - -
Lja5g2853 769 Coils Coil 77 104 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2853 - - gmx:100789623 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2853 5 56104223 56107731 Lja5g2853 5 56104223 56107731 ECH