Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2841 ATGAAGTTCTGGAAGATTCTGAGCAACCAGATCGAGCAAACGCTACCTGATTGGCGTGACAAGTTTCTCTCCTACAAGGATCTCAAGAAACAGCTCAAGCTCATAGCCCCCAAAGAACCCTCCTCCTCCTCCTCCTCCCTCAAACGACGCCGTTCCGACAACGACGACGGCGCCGGCGAGGTCTCCAAAGAGGTCAACGATTTCCTCCGTCTTTTGGAGGTCGAGATTGAAAAGTTCAACGCCTTTTTCGTCGAGATGGAAGAGGAATATGTAATCAAATGGAAGGAGTTGCAAAACAAAGTTGCTTGGGCCAAGAATTCAGATGTAGATTTGATGCCAGTAGGGAGGGAAATAGTGGATTTGCATGGAGAGATGGTTTTGTTGGAGAACTACAGTGCACTTAACTACACAGGTCTAGTGAAGATAATAAAGAAATATGATAAGCGAACTGGTGCGCTACTTCGATTACCTTTTATCCAAGATGTATTGAACCAGCCCTTCTTCAAAATTGATGTTCTTAACAAGCTTGTAAAGGAGTGTGAGGTGATGCTAAGTATTCTTTTCCCCAAAAGTGGGTCTCTAGGTCCATCCTTCTCAACTAGTGATCTTGAGGAAGAAGCGTGCAGTTCCATGACTGCAAATGAAAATAGAGAGACACTGAAGCAGGTGCCAAAAGAACTTGCCGAAATCCAAAATATGGAGAACATGTTCATCAAACTAACTACATCAGCATTGGATACCTTGAAAGAGATTAGGGGTGGAAGCTCGACCGTAAGCATATACTCATTGCCTCCGCATAAGGAGGCTATGGTAGAGCAAGCAGCCAAATAG 831 0.4465 MKFWKILSNQIEQTLPDWRDKFLSYKDLKKQLKLIAPKEPSSSSSSLKRRRSDNDDGAGEVSKEVNDFLRLLEVEIEKFNAFFVEMEEEYVIKWKELQNKVAWAKNSDVDLMPVGREIVDLHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQDVLNQPFFKIDVLNKLVKECEVMLSILFPKSGSLGPSFSTSDLEEEACSSMTANENRETLKQVPKELAEIQNMENMFIKLTTSALDTLKEIRGGSSTVSIYSLPPHKEAMVEQAAK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2841 276 MobiDBLite consensus disorder prediction 44 60 - -
Lja5g2841 276 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 269 IPR031142 GO:0016036
Lja5g2841 276 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Lja5g2841 276 MobiDBLite consensus disorder prediction 36 60 - -
Lja5g2841 276 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 269 - -
Lja5g2841 276 Pfam SPX domain 117 161 IPR004331 -
Lja5g2841 276 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2841 Lja-Chr5 55934967 55938902 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2841 - - adu:107495354 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2841 5 55934967 55938902 Lja5g2841 5 55934967 55938902 ECH