Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2836 ATGAGAAGAAGAATCTGGAACTTTTTCTCTAACTCCAAGAAGGGACTCACTTCTGAATTATTCACACCGGCATCATCCTCAACCTCCAATTTCCGCCGCCTAAACGCGCTTCGCTCTTACTGCGATCAATCCCACCTTCGTCTCCAAAACCGCACAGGTCTGCTTGCTCAGTATAAGAATCTGGTTGATCAAGGGAAGTTGCAGCATGATCCTTACCAAGAAAGTGTTGCCTCAGAACTTGAGAAATTGGTTGCAAGGCTGGAGCAGTATGAGAGAGAAATGGAAGAGTATCATGTGAATCTAGCTGAATGGGAGAAGAATCGGGAGAACGAGCGGCGGAAGCTTCTCATGGAGGAAGTGGAGTCACAACAGAAGGAGGGAGGAGATTGGTGGAAACAGTTGAATAACAAACTTACTGGAAGGAGGGGCTCTAGAAATAAACCAGTAAGTGTGGAGCCAGGAGTAGGGAAATGGGTGTCATATCTTAAACGTGAGATGAAGTTGGATTCAGTAGTTGGTCGCTATCCAACTGCTCCTCCTCCTCCTAAAGGGCTTTACATATACGGAAATGTCGGCAGTGGGAAGACAATGCTGATGGACATGTTTTATCGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGATATCACTTTCATGAGGCCATGCTTAGAATAAATGAACATATGCACAAGATATGGAAGAAACAATTGGAAGAGAAGACTTTGCAGTCAAGCATTGCTGGTTGGATTATGAATCTTCCCTTTGACATTAAAGCTAAGGAGTGGCTAGCTGCAGAAGAAAGATACAAGCAAGAGGTACGGATGAAAAACATTCTTCCTGCTGTAGCAGAGGAGTTTTTTCTGGATCGAGAAGGAGACGACAAGGGAGCTAGCATTTTGTGCTTTGATGAGATTCAGACTGTTGATGTATTTGCCATTGTAGCTTTATCTGGAATTCTAAGCAATTTGCTGAGCCGTGGAACCGTTATTGTGGCTACCAGTAATCGAGCACCAAATGACTTAAATGAGCCAGGTATGCAACAAGAAATATTCCAAAAACTTCTCTCCAAATTGGAAGAACATTGTGAGAAGGTATTAGTAGGGAGTGAAATTGACTACCGTCGTTTCATAGCACGAAGATCAGTCAACCTGGTACACTATTTCTGGCCTACTGGAAGGGAAACTATCAATGAATTTGAGAAAATCTGGCATGATGCAACAGGCAGATTTGGAGGAAATATAATATCCAATACCATCTCAGTAATGTTTGGAAGGATACTTGAGGTTCCTGAAAGTTGTGAAGGAGTTGCACGCTTCACATTTGAGTATTTGTGTGGTCGTCCGTTGGGTGCAGCAGATTATATAGCAGTAGCTGAAAACTATCACACTGTTTTCATTTCTGACATTCCAGTGATGAGTATGCGCATTCGTGACAAGGCACGGAGATTTATCACCCTTATTGATGAGTTATACAATCATCATTGCTGTCTATGTTGTTTAGCATCCTCCTCAATTGACGAATTATTTCAAGGAACTGAAGAGGGCACACTTTTTGACTTGGATAGTTTCCAGTTTGAAACAGAGACTGAAGGTGGGAAACTTCGCCGCAATGTCTTTGCAGATGGCAGTCTGAGCTCAGTAGGTTCCGTGGCTAGCATCATGTCCATGCATTCTGGTCAAGAAGAGATGTTTGCTTTTCGCAGAGCTGCCTCCCGCCTCATTGAAATGCAAACGCCATTATACTTGGATGGAGTCAGTAATTTCCACCCTTATTTTCAGAGGCAACATAAAAATTTCAAAAGGAATTGTGACCACAGCATACTACCTGAGTTATCAGTCTGA 1842 0.4283 MRRRIWNFFSNSKKGLTSELFTPASSSTSNFRRLNALRSYCDQSHLRLQNRTGLLAQYKNLVDQGKLQHDPYQESVASELEKLVARLEQYEREMEEYHVNLAEWEKNRENERRKLLMEEVESQQKEGGDWWKQLNNKLTGRRGSRNKPVSVEPGVGKWVSYLKREMKLDSVVGRYPTAPPPPKGLYIYGNVGSGKTMLMDMFYRATEGIVKHRRRYHFHEAMLRINEHMHKIWKKQLEEKTLQSSIAGWIMNLPFDIKAKEWLAAEERYKQEVRMKNILPAVAEEFFLDREGDDKGASILCFDEIQTVDVFAIVALSGILSNLLSRGTVIVATSNRAPNDLNEPGMQQEIFQKLLSKLEEHCEKVLVGSEIDYRRFIARRSVNLVHYFWPTGRETINEFEKIWHDATGRFGGNIISNTISVMFGRILEVPESCEGVARFTFEYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLCCLASSSIDELFQGTEEGTLFDLDSFQFETETEGGKLRRNVFADGSLSSVGSVASIMSMHSGQEEMFAFRRAASRLIEMQTPLYLDGVSNFHPYFQRQHKNFKRNCDHSILPELSV* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2836 613 Gene3D - 166 375 IPR027417 -
Lja5g2836 613 Pfam AFG1-like ATPase 174 513 IPR005654 GO:0005524|GO:0016887
Lja5g2836 613 PANTHER ATPASE N2B 47 602 IPR005654 GO:0005524|GO:0016887
Lja5g2836 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 381 IPR027417 -
Lja5g2836 613 Coils Coil 73 126 - -
Lja5g2836 613 PANTHER AFG1-LIKE ATPASE FAMILY PROTEIN 47 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2836 Lja-Chr5 55866190 55876891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2836 - - mtr:MTR_1g012370 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2836 5 55866190 55876891 Lja5g2836 5 55866190 55876891 ECH