Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2821 ATGGGTTTTGGCCAAGAAGAAGAGAAAGAGCAGGCCGCCGCCGCCGCCGTGAAGTGCGTGTGGGTTCACGGCCCTATCATTGTAGGTGCCGGACCCTCCGGGATAGCCGTGGCGGCGTGCCTGTCGGAGCAAGGTGTCCCAAGCGTGATTCTTGAGAGGAGTAACTGCATAGCCTCACTATGGCAAAACAGAACCTATGACCGCCTCAAACTGCACCTTCCAAAACACTTCTGTGAGCTTCCATTGATGAGTTTCCCCAACGGTTTCCCAAAATACCCTTCCAAGTACCAGTTCATCTCCTACATGGAGTCCTACGCAGCCCACTTCAACGTCAAACCCCGGTTCAACCAAACCGTGCAGAGCGCGGTTTATGAATCGGGGTCTGAGTTTTGGGTTGTGAGGACTCAGGATTTTGAGTACGTTTCTCCGTGGCTTGTGGTGGCTACCGGTGAGAATGCTGAGCCTGTTTTTCCTAAGCTTCCTGGGTTGGACTTGTTTCGTGGTCCTGTTGCTCACACCAGTAATTACAAATCTGGTTCTGAATACAAAAACAAGAAGGTTTTGGTGATTGGTTGTGGGAATTCTGGAATGGAGGTTAGCTTGGACCTTTGCAGGCACAATGCCATTCCTTACATGGTTGCAAGAAATACAGTACATGTTCTTCCGAGGGAGATGTTTGGCTTCTCATCATTTGGAGTAGCTATGGCACTTTACAAATGGCTTCCATTAAAGATAGTAGACAAGCTCCTCTTACTAGTGGCTAGTTTCACTTTGGGCAACACAAATCACTATGGAATCAAGAGGCCCAAAACAGGACCAATTGAGCTCAAACTTGCCACTGGGAAAACCCCTGTTCTTGATGTTGGTCAAATAGCACAAATAAAATCCGGCAACATAAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAATGGTGCCAAATTTTTGGATGGACAAGAAAAGGAATTTGATGCTATAATCTTGGCAACAGGATACAAAAGCAATGTCCCTGTTTGGCTTAAGAACCGTGAATTTTTCACCGAAGACGGAATGCCGAAAACACCCTTTCCTCATGGTTGGAAAGGAGAGCGTGGATTGTATACGGTGGGGTTCACGAGAAGAGGTCTTCAGGGAACGTCATCTGATGCCATTAAAATTGCTGAAGATATAGTTGGGCAGTGGAGAATAAAAGGCAAAGACAAGAATTGTTGTGATTCACATATCATCGTACTCAATAATTCATAG 1245 0.4643 MGFGQEEEKEQAAAAAVKCVWVHGPIIVGAGPSGIAVAACLSEQGVPSVILERSNCIASLWQNRTYDRLKLHLPKHFCELPLMSFPNGFPKYPSKYQFISYMESYAAHFNVKPRFNQTVQSAVYESGSEFWVVRTQDFEYVSPWLVVATGENAEPVFPKLPGLDLFRGPVAHTSNYKSGSEYKNKKVLVIGCGNSGMEVSLDLCRHNAIPYMVARNTVHVLPREMFGFSSFGVAMALYKWLPLKIVDKLLLLVASFTLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQIAQIKSGNIKVMEGVKEITRNGAKFLDGQEKEFDAIILATGYKSNVPVWLKNREFFTEDGMPKTPFPHGWKGERGLYTVGFTRRGLQGTSSDAIKIAEDIVGQWRIKGKDKNCCDSHIIVLNNS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2821 414 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 14 410 - -
Lja5g2821 414 SUPERFAMILY FAD/NAD(P)-binding domain 26 214 IPR036188 -
Lja5g2821 414 Gene3D - 24 394 IPR036188 -
Lja5g2821 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 182 206 - -
Lja5g2821 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 143 151 - -
Lja5g2821 414 PRINTS Pyridine nucleotide disulphide reductase class-II signature 24 46 - -
Lja5g2821 414 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 14 410 - -
Lja5g2821 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 25 44 - -
Lja5g2821 414 PRINTS FAD-dependent pyridine nucleotide reductase signature 186 204 - -
Lja5g2821 414 SUPERFAMILY FAD/NAD(P)-binding domain 183 387 IPR036188 -
Lja5g2821 414 Pfam Pyridine nucleotide-disulphide oxidoreductase 26 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2821 Lja-Chr5 55622696 55625095 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2821 K11816 - gmx:100798781 668.307