Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2818 ATGTCTTCTATGAATATATTCACCCCCATTCCACTCACCAGTGGCTCCCGGAATCCAACCAACTATTTTCCCCGGCTGCAACGACCCAACTCAGTGCTTTTCGCGGTGAATTCACCACCACCACCACCACCATCTCCTCCTGAAATAGAGCTCGAGTTCATTGGGCCAAAGGGGGAAGGTGATCTGGATAAAGCAAAAGCGATCAGCGGAGCGAAGCTGTTGAGGAACATCATGTTGGATAACAAGATCGAGCTTTATGCCACTTATGGGAAGTTGATGAACTGTGGTGGAGGTGGTAGCTGTGGAACTTGTATCGTAGAGATTATTGAAGGAGACGATCTTTTAAATGAAAGAACAAATACTGAACTCCGATATCTTAAGAAGAAACCGGAATCTTGGAGGTTGGCTTGTCAAACTATTGTTGGAAACAAAGAAAACTGTGGCAAGGTTGTTGTTCAAAGGATTCCTCAGTGGAAGAAGTAA 483 0.4493 MSSMNIFTPIPLTSGSRNPTNYFPRLQRPNSVLFAVNSPPPPPPSPPEIELEFIGPKGEGDLDKAKAISGAKLLRNIMLDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGDDLLNERTNTELRYLKKKPESWRLACQTIVGNKENCGKVVVQRIPQWKK* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2818 160 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTIC 45 159 - -
Lja5g2818 160 PANTHER FERREDOXIN/ADRENODOXIN 45 159 IPR001055 GO:0051537|GO:0140647
Lja5g2818 160 SUPERFAMILY 2Fe-2S ferredoxin-like 73 143 IPR036010 GO:0051536
Lja5g2818 160 Pfam 2Fe-2S iron-sulfur cluster binding domain 92 141 IPR001041 GO:0051536
Lja5g2818 160 Gene3D - 57 160 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2818 Lja-Chr5 55518375 55521970 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2818 - - gmx:100807125 244.973