Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2811 ATGGAAGGTAGAGAAGAGAACTCCAATGGCACTGCAATTCCCAAGAAATCGAGATCCCTTGATCTTAAAAGTTTATATAAATCAAAATTGACTGAAGAGAGTGGTTCCAAAAAGAGCTTGCAGAAGACAGCTAGTAGTAGTAGTAGTCCAGGGGGTGGTGGTGATGAGAAGAGATTCAAGAGAAAGAGGGCTAGGAAGGAAGTGTCGCTGAGTAGCTTAGAAAATGCTGATGGTAGCAGGAAGAAGGGGGTTGATGAGGAAGGTCAGCAAAGGCCGAGTTCTGGTGGAAAAGATTTGCCTGAATTGAAGTTGGGGCTGAGTCAGAGATTGAGTGGCGGTAGTGGGCTCAATAGAGCTCCACTTAGTGTTGGTGGTGATGGCGTTTGTATTCCCAAGCGTAAGAGGAATTTTGTGGGGCGGAAGAAATCCCAAGTTGGTCAAGCATCGAATCTGGTAGGGCAGGCTAGTGGTACAATTGACCATGACAGTCAGGTGCCTAAGTTAGGTAGTGATGATTTGGGTAAGGGGGTGGCTGATTCTTCAAAGATTAAATATTTAGATGAATTTAAAGAAAACGGCAATAGTGATTCAGTTTCAGTTCAGCATATCAAGGGGAATGGGGATCGTGCCTCTCATTCTGTTGTAAATAGTGGTGATTCCTCTTTAACAAAGACAAAGAAGAAGGTTAGGAAACGAAAGGCTTTGGCTTCAGATAGAATTAGGGTTCCCGAAAAGGCTGCCGAGCCTTTCATTGATAGTTGTAAAATATCTGATGATTTGCAGGAAGATGATGAGGAAAATCTTGAGGAGAATGCAGCAAGGATGCTTTCTTCAAGGTTTGATCCGAGCTGTACTGGCTTTTCTTCTAGTGGCAAGTCTTCTCCAATGCCATCAGCAAATGGTTTGTCCTTTTTGCTATCTTCTGGTCGAAATACTGTTAATCGTGGGTCGAAGTCTCGGTCGGGCTCAGAATCAGCATCAGTTGATGCTGCTGGCAGAACTCTGAGGCCAAGGAAACAACACAATGACAAGGGTACCAGGAAGAGGCGTCACTTCTATGAAATTCTGTATGCTGATGTGGATGCATATTGGCTACTGAACAAAAGAATTAAAGTATTTTGGCCTTTGGACCAGAGTTGGTATTTTGGCCTTGTAAATGACTATGATGAAGTAAAAAAGCTTCACCATATCAAGTATGATGATCGAGATGAAGAATGGATTAATCTCCAAACTGAGAGGTTCAAACTCCTGTTACTTCGTTGTGAAGTTCCTGGAAGTGCAAAAGGGGGAAGAGCTTTAGCAAAACGTAGAAGTTCTGATCAGCAAAATGTCAGCAAGTCCAGAAGAAAGAGGCAAAGAGAGGAGATTACAGGGGAAGATAGTTGTGGTGGGAGTTCTATGGATTCGCAGCCTATAATTTCGTGGTTGGCTCGATCTTCTCATCGGCTTAAGTCTTCTTGTCATGGTGGTAAGAAACAGAAAACTTCTGTTATGCTTCCAAGTACGACCTCATCATTGTTATATGATGAACCTGTCGCAGTAAAAGGGCATGCAGCTAAGAATTCCTTGCGGGATGTTGAAAATAATTTGTCTAGTGATTCTGTATCACATGATAAGTTAGGTGATAATTTTAGGGAAAAGTTCTCATTGCAAAGCTCCACTTGCACTAAAGATGACAAGAAGCCTATTGTGTATTTTAGAAAACGGTTTCGAAGGTCAGCTCCCATATCCCCTCATGTTCCTGAGGGTAACCATGTTAGTATAAGCTCACCATGTTCTGTTTCCTTTGATCTTTTGGCTGGACGGGTTCAGAATGTAAAAGAACCGAGTGGGAGGGTTGAGATTCAAGGGCCATTGTACTTCACTTACAATGAGGGAGTATCTAAAATATTTTGGGAGATGGAGTTAGCTTCATTCAAATTTGACTTAAAATTTCCAATACGTTTGGTTTTGAATGAAGCTTTCCAATCAGAGAATTTGTGGTTACCCTATGCTGCTCTGCTGTTTCAGTGTGGTGCAGTTATGACCACATGGCCAAGAGTTAGTTTGGAGATGCTTTTTGTTGATAATGTGGTTGGGTTAAGATTGCTATTATTTGAAGGCTGCTTGAAGATGGCTGCAGCCTTTGTCTTTTTTGTCCTTAGGGTATTTCGTCAACCTGTGTGCCGAGGGATGTCTGACTTGCAGCTGCCAGTTACATCTATTGGATTCAAGTTTTCCAGTCTTCATGTTATTAAGAAGCCACTTGTGTTTGTACTCTATAATTTCTCTAGAGTGAAGAATTCACAGTGGGTGTTCTTAGATTCTAAGCTTAAGAGGCATTGCCAGCTCAGTAAGCAGCTCCATCTTTCTGAGTGCACATATGATAATATTCAGGCGCTTCAAAATGGGTACAGTGAGTTCCCAAGGACTTCCATCAGTGAGTCCTCATCATTCAAGGTCGTGCGCACGAGGAGTAGGCAAGGGATTAACATCATGGGTGCTTCCAAAATGTCCGCTCCAGTTGAAACTCATCAGTCTTCTCATGCTGGCGAGAGGAAGCTTCCTCCATTTGCTCTTTCTTTTGCTGCTGCACCTTCATTTTTTCTCTGTTTGCATCTTAAGTTGTTGATGGAGCAGTCGACAGCTCAAATTAGCACTTGTAATCTTGCACCAAATGATGATCAGGAAGATTCTGGTTTGGTGACAGATGACTGTTCAAGCATTGATGATTGCTCAAACCGGAATACAGAAATTATTCTCAGGAAAGGTGTGATGGCATTGCCAAATGATGCTGCAGGTGGTGCATCGTCTGGAGCTGATTTAGATCAGGTAATTGGTTCCTCTACTTGTAGTGATCAAGTTTTATCTCAAAATTACCAGAACATTGGCCTAAAAGGTGCTGAAACTTCTATTTCCAATGGTTCTGAGAAACGTGGCACTATTGACTTATCAAAGTGGCAATCCCATCATTCTGCACTAAAGCTGGACTCTTTACCTTCGAATTCTCTAATACACCAGGATAAGGCTGATTCTCATTCTTTTATGGGCGATCTCAATGTCCAAATTCCTTCAGTTGATGAATTTGAGAAACCTAATGCTCAAAACTCTCCTGATTTCTCTTGGAATATTAATGGAGGTGTACCAAGCTCCAATCCAACTGGTCCAAGAAGCTCTTGGCATCGGAGTCGGAATAGTTCCTTGTCATTGGGATTCCAGTCACATGGGTGGTCTGATGTCAAGGCTGACTCTATTTACAATGATTTTAGCAATGGACCCAAAAAGCCACGGACACAGGTATCATATTCAGTGCCTTTTGCAGGGTATGAATATAGTTCAAGGCACAGAAACCATCATCAGAAAGGGCTTCCTCACAAACGAATTAGAAAAGCTAGTGAGAAGAAGTCATCAGATGTTGCTAGGGGCCCTGAAAAGAATTTTGAATGCTTATCTTGTGATGTGAATGTCTTGATCACTCTTGGTGATAAAGGTTGGAGAGAATCTGGGGCCCAAGTTGTACTAGAGCTGTTTGACCATAATGAGTGGAAACTCTCCGTAAAACTCTTAGGAGTTACAAGGTATTCATACAAAGCACATCAGTTTATGCAACCTGGATCAACAAATCGTTACACACATGCTATGATGTGGAAAGGAGGGAAGGATTGGATCTTGGAATTCCCAGATAGGAGTCAGTGGACCCTTTTCAAGGAGATGCACGAGGAATGCCACAACCGGAACATCCGTGCTGCTTCAGTTAAAAACATACCTATTCCTGGTGTTCACTTGATCGAAGAAAATGATGATTATGGATCTGAGGTAAATTTTATTCGAAGCTCTAAGTATTTCCGACAGGTTGACACAGATGTTGAGATGGCCCTGGATCCATCCCGTGTTCTGTATGACATGGATAGTGAGGATGAGCAGTGGATTTCAAATGTTAGACATTCTGAAGATCTTAACTGTGACTTGAATGGGATCTCAGAGGAGATGTTCGAGAAGACAATGGACATGTTTGAAAAGGCTGCATACACTCAGATGCGCGATCAGTTTTCACCTAACGAAATAGAGGAACTCATGATTAATGTTGGGCCTCTGTGTGTAGTCAAAATCATTTACGACCATTGGCAGCAGAGAAGGAAGAAGAAGGGGATGGCTTTAATACGGCACCTTCAGCCGCCTCTGTGGGAAAGATATCAACAAGAAGTGAAGGAGTGGGAAGCAGCCCTGACGAAGAGCAACCTCTCTTCTAATGGAGGGCTGGATAAGGTTGTGACTTTGGAGAAGCCACCCATGTTTGCGTTCTGTTTGAAACCAAGGGGTTTGGAATCACTGAACAAGGGATTTAGAAGTCGATCACAAAAGAGAATTTCAGTCTCTGGGCATACTGATAGCTTCCACCCTTTTGGAAGAAGATTGAATGGCATAGCATATGGTGATGATAAGTTTGTATACCCAGGCCATAGTTATGATTCTTTGGATGATTCCCCATTGCCCCAGACATCTCCTAGGTTATTCTCACCACGGGATGCTTTCAACATGAGATATTATTCTGCGAGCAACGATGGGTACTACAGAAATCACAATCCAAAATCTCACAGGAGCAAGTCCAAGAAATTTGGGTCCTATATGTATCAAAACGTTGCACAGACAACAGCTTATAATCAGAGAATGTCATTGTCAGGAAAGAGAAATGGAGTTACTAGATGGAACATGGGCGATTATGACTTGCCAGGTCACAGGCAGTACCTACCAGATGGCCCTCAGAGGCATGGGATTGAGCAAATGGATGGTTCAGACCATGATGAGTTTAAATTGCGTGATGCCTCAGGTGCTGCTCAGCATGCACGCAAAATGGCGCAGCTAAAAAGACAGAGGGCTCAGAGATTGCATTATAGAGCAGATCTAGCTATTCACAAGGCTGTGGTTGCTCTTATGGCTGCTGAAGCAATGAAAGGTTCTGAGGACTCGGTTGGTGATAGTAGTACAACAAGTACCTGA 4977 0.4276 MEGREENSNGTAIPKKSRSLDLKSLYKSKLTEESGSKKSLQKTASSSSSPGGGGDEKRFKRKRARKEVSLSSLENADGSRKKGVDEEGQQRPSSGGKDLPELKLGLSQRLSGGSGLNRAPLSVGGDGVCIPKRKRNFVGRKKSQVGQASNLVGQASGTIDHDSQVPKLGSDDLGKGVADSSKIKYLDEFKENGNSDSVSVQHIKGNGDRASHSVVNSGDSSLTKTKKKVRKRKALASDRIRVPEKAAEPFIDSCKISDDLQEDDEENLEENAARMLSSRFDPSCTGFSSSGKSSPMPSANGLSFLLSSGRNTVNRGSKSRSGSESASVDAAGRTLRPRKQHNDKGTRKRRHFYEILYADVDAYWLLNKRIKVFWPLDQSWYFGLVNDYDEVKKLHHIKYDDRDEEWINLQTERFKLLLLRCEVPGSAKGGRALAKRRSSDQQNVSKSRRKRQREEITGEDSCGGSSMDSQPIISWLARSSHRLKSSCHGGKKQKTSVMLPSTTSSLLYDEPVAVKGHAAKNSLRDVENNLSSDSVSHDKLGDNFREKFSLQSSTCTKDDKKPIVYFRKRFRRSAPISPHVPEGNHVSISSPCSVSFDLLAGRVQNVKEPSGRVEIQGPLYFTYNEGVSKIFWEMELASFKFDLKFPIRLVLNEAFQSENLWLPYAALLFQCGAVMTTWPRVSLEMLFVDNVVGLRLLLFEGCLKMAAAFVFFVLRVFRQPVCRGMSDLQLPVTSIGFKFSSLHVIKKPLVFVLYNFSRVKNSQWVFLDSKLKRHCQLSKQLHLSECTYDNIQALQNGYSEFPRTSISESSSFKVVRTRSRQGINIMGASKMSAPVETHQSSHAGERKLPPFALSFAAAPSFFLCLHLKLLMEQSTAQISTCNLAPNDDQEDSGLVTDDCSSIDDCSNRNTEIILRKGVMALPNDAAGGASSGADLDQVIGSSTCSDQVLSQNYQNIGLKGAETSISNGSEKRGTIDLSKWQSHHSALKLDSLPSNSLIHQDKADSHSFMGDLNVQIPSVDEFEKPNAQNSPDFSWNINGGVPSSNPTGPRSSWHRSRNSSLSLGFQSHGWSDVKADSIYNDFSNGPKKPRTQVSYSVPFAGYEYSSRHRNHHQKGLPHKRIRKASEKKSSDVARGPEKNFECLSCDVNVLITLGDKGWRESGAQVVLELFDHNEWKLSVKLLGVTRYSYKAHQFMQPGSTNRYTHAMMWKGGKDWILEFPDRSQWTLFKEMHEECHNRNIRAASVKNIPIPGVHLIEENDDYGSEVNFIRSSKYFRQVDTDVEMALDPSRVLYDMDSEDEQWISNVRHSEDLNCDLNGISEEMFEKTMDMFEKAAYTQMRDQFSPNEIEELMINVGPLCVVKIIYDHWQQRRKKKGMALIRHLQPPLWERYQQEVKEWEAALTKSNLSSNGGLDKVVTLEKPPMFAFCLKPRGLESLNKGFRSRSQKRISVSGHTDSFHPFGRRLNGIAYGDDKFVYPGHSYDSLDDSPLPQTSPRLFSPRDAFNMRYYSASNDGYYRNHNPKSHRSKSKKFGSYMYQNVAQTTAYNQRMSLSGKRNGVTRWNMGDYDLPGHRQYLPDGPQRHGIEQMDGSDHDEFKLRDASGAAQHARKMAQLKRQRAQRLHYRADLAIHKAVVALMAAEAMKGSEDSVGDSSTTST* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2811 1658 MobiDBLite consensus disorder prediction 204 222 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 20 36 - -
Lja5g2811 1658 Gene3D - 367 412 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 430 468 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 1 176 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 37 52 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 204 226 - -
Lja5g2811 1658 PANTHER OS01G0179500 PROTEIN 2 1651 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 54 70 - -
Lja5g2811 1658 PANTHER PHD FINGER PROTEINS 2 1651 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 142 163 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 312 346 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 1106 1133 - -
Lja5g2811 1658 Pfam Enhancer of polycomb-like 1236 1333 IPR019542 -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 441 458 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 312 328 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 78 92 - -
Lja5g2811 1658 MobiDBLite consensus disorder prediction 1026 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2811 Lja-Chr5 55428623 55437766 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2811 - - gmx:100789801 2019.97