Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2803 ATGGCAACATTGATTTCCAAAATATCACTATTATCCAACCCCAAACTCATTCACCACCGTCGTCGCAATTTCACTCTCCTCTCTCGTTCCGCCGCGGCCACTGCTATCAGCAGAGCCAATAAGCGGAAGGCGTTGGAGAAGGAGAAGGAGAAGAGAAGGACGCGTTCCGACAAAGAAATCGACAAGGACGCTTTGATTGACCTTTACAACTCCAACAATCTTCATAATCCCAATCATATCCCTGTCATGCTTCCTCAAGTTTTGGACGTTTTCTCAAATTCATGCTTGAACTCCTTCGTTGATTGCACTCTCGGAGCCGCTGGCCACTCCACCGCTGTGATTAGGGGTCACCCAGAGTTGAAGTACTTTGTTGGGATGGATGTGGACCCCGTGGCACGTGAAATGGCTCAAACACGCCTCAATTCCGTTTTGCATGGGAGGGAGTCCAGTGTTAGAGTATTTACAGTGTTAAGGAATTTTAGACACATCAAGTCTGTCCTTGGAGAAATGGGTGAGCAGGACTTAGAAGTTGATGGCATCTTAATGGATTTGGGAATGTCATCTATGCAGGTGGACGATCCTCAGAGAGGATTCAGTGTGCTTGGTGATGGACCCCTTGACATGCGTATGGATCCTCAGGCAAGTCTTACAGCAGAAGACGTTTTAAATTCTTGGCCAGATTCTGAAGTGGGACGAATCCTAAGGGAGTATGGGGAAGAAAGTAATTGGCGTACCCTGCAAAAGAAAATTGTTGAAGCTCGAGTACATGGTGGTTTGCATTCCACTGGTGACTTGCTGGATCTTATCCGGAGTGTGACTCCTGCAATGAGAGGTGGAAGGCAAGGTTGCATAAAGACAGCAACCCGGGTGTTTCAAGCTCTGAGAATTGCTGTTAATGATGAACTAAAGACTCTTGAGGATTCCCTCTATTCTTGTTTTGACTGCCTTGCACCTGGGGGTAGGCTTGCTGTCATATCTTTTCACAGTCTGGAGGACAGAATTGTGAAGCAGACATTTCTCGAGATCATTAAAGGGAGAGATGATGACGGGGACAGGGGGAGCTGCAATAATGATCTTGGGAAGACTAGTGATGAAATTAAAGAAAAAGAAGCATGGATAAGACACACAATACATGGATCAAATGGAATAATTCTTACAAAAAGACCAATCACGCCTTCAGAAGAGGAAGAAACGTTAAACCGCCGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCTTTGA 1245 0.457 MATLISKISLLSNPKLIHHRRRNFTLLSRSAAATAISRANKRKALEKEKEKRRTRSDKEIDKDALIDLYNSNNLHNPNHIPVMLPQVLDVFSNSCLNSFVDCTLGAAGHSTAVIRGHPELKYFVGMDVDPVAREMAQTRLNSVLHGRESSVRVFTVLRNFRHIKSVLGEMGEQDLEVDGILMDLGMSSMQVDDPQRGFSVLGDGPLDMRMDPQASLTAEDVLNSWPDSEVGRILREYGEESNWRTLQKKIVEARVHGGLHSTGDLLDLIRSVTPAMRGGRQGCIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLEIIKGRDDDGDRGSCNNDLGKTSDEIKEKEAWIRHTIHGSNGIILTKRPITPSEEEETLNRRSRSAKLRVIQKL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2803 414 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 75 413 IPR002903 GO:0008168
Lja5g2803 414 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 53 414 IPR002903 GO:0008168
Lja5g2803 414 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 79 414 IPR002903 GO:0008168
Lja5g2803 414 Gene3D Putative methyltransferase TM0872, insert domain 194 301 IPR023397 GO:0008168
Lja5g2803 414 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 414 IPR029063 -
Lja5g2803 414 Pfam MraW methylase family 78 413 IPR002903 GO:0008168
Lja5g2803 414 SUPERFAMILY Putative methyltransferase TM0872, insert domain 196 299 IPR023397 GO:0008168
Lja5g2803 414 Gene3D Vaccinia Virus protein VP39 79 411 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2803 K03438 - gmx:100787277 551.592