Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2796 ATGGGCACAGCAGTTCACCTTTGTGGCTGTTTCAATTCCACCACTTCCAATTCTCATCAACTTCAACCTTTCAAAACTCGTACCAAATGCAACTATGCTGCTCAATCAGTGAAAGCGCTTCCTATTCGTATATTATCGGTGGGGAAGAAGCGATCGCGTGGACTGCAACTCTTGGTTGATGACTACATTGAAAAGATTAAGTATTATTGTAGTGTTGAGGATGTTCAAATACGGCCCAATCCGAGAAATGCACGTGACCACAGGGCTCAGGTTGATGATGAAGATACGGCAGTGATGAACATTATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACGTGGGCAAGACATAGGATCTGAGCAAATGGCAGAGCTGGTGGGTGGTGCAAGTAATACTGGTGCTTCACGATTATCTTTCTGTATTGGCGGTCCTTATGGTCATGGAAGAAAAATACGAGAACGTGCTAACATATCTATCAAGTTATCTTCACTGGTTTTAAATCATCAAATAGCATTACTTGTGCTCATGGAGCAGCTTTACAGGTCATGGACAATTTTGAGAGGACAAAAGTACCATCATTAG 585 0.4239 MGTAVHLCGCFNSTTSNSHQLQPFKTRTKCNYAAQSVKALPIRILSVGKKRSRGLQLLVDDYIEKIKYYCSVEDVQIRPNPRNARDHRAQVDDEDTAVMNIIRSDDWVVMLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGHGRKIRERANISIKLSSLVLNHQIALLVLMEQLYRSWTILRGQKYHH* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2796 194 Gene3D - 41 194 IPR029026 -
Lja5g2796 194 PANTHER METHYLTRANSFERASE 14 194 IPR003742 GO:0006364|GO:0008168
Lja5g2796 194 SUPERFAMILY alpha/beta knot 41 192 IPR029028 -
Lja5g2796 194 SFLD SPOUT Methyltransferase 15 194 - -
Lja5g2796 194 CDD RlmH-like 42 194 IPR003742 GO:0006364|GO:0008168
Lja5g2796 194 Pfam Predicted SPOUT methyltransferase 42 193 IPR003742 GO:0006364|GO:0008168
Lja5g2796 194 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 40 194 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2796 K00783 - gmx:100796609 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2796 5 55231500 55236675 Lja5g2796 5 55231500 55236675 ECH