Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2792 ATGGGTTTCAAAAGCTCTTCTCTTCTCTGCTTGGCTCTTGTCCTTGCAGTCTCATCTGCCACTCAGGCATTTGACATCACAAAAATTCTATCCCAATACCCAGAGTTCTCCACATTCAGCAAATACCTCACCGAAACCAAGCTCACCGAGCAAATAAACAGCCGCAACACTATCACCGTCCTCGCCGTCGACAATAGCGCCATCTCCGCCATCTCCGGCAAGTCCGCTGATGCCATCAAGGCCGTCGTCAGCACCCACATTGTCCTCGACTTCTTCGATGAGAAGAAGCTCATGGAAGCCCTCGGCAGCAAACAACAATTGACAACCCTCTACCAAGCCTCCGGCCTTGCCGTGAACCAGCAAGGGTTCCTCAAGGTTGCACTCATCGGCGAGGGTGAGGTTGCCTTCGGCTCCGCCGTCAACGGTGCTGCCACCGATGCCGAGCTCGTGAAGACCGTCACCAGCCAGCCCTACAACATCTCCGTCCTTCAGGTCTCTAAGCCTATTGTGTTCCCTGGTGCCGACAAGGCTTCTCCTTCACAGGGTGCTGCTAAGGCCCCAGTGCCCGCACAAGGTGCCAAGGCCCCTGTGCCCGCTAAGGGCGCCAAGGCTCCCGTTGCTGCACAGGGTGCCAAGGCACCTGCTCCTTCAGCTGACAAGGTTGTGGCAACATCACCTTCCAGTGATGTTGCTGAAACCCCAGTTGATGCCCCAACAGCATCAAGCCCATTGGCTTCAGGTCCGGCTTCAGGTCCCGATGCTGCAGATGCTGCAGCTCCTTCCAGCGCTTCAAGCACCACCAAGGTTGGTTTGGTTGGAGCAGTGATGGCCTTTGCTTCTGTCTTGGTCGTTTTGTAA 858 0.5594 MGFKSSSLLCLALVLAVSSATQAFDITKILSQYPEFSTFSKYLTETKLTEQINSRNTITVLAVDNSAISAISGKSADAIKAVVSTHIVLDFFDEKKLMEALGSKQQLTTLYQASGLAVNQQGFLKVALIGEGEVAFGSAVNGAATDAELVKTVTSQPYNISVLQVSKPIVFPGADKASPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSASSTTKVGLVGAVMAFASVLVVL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2792 285 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 262 IPR033254 -
Lja5g2792 285 SUPERFAMILY FAS1 domain 29 172 IPR036378 -
Lja5g2792 285 MobiDBLite consensus disorder prediction 176 261 - -
Lja5g2792 285 Gene3D FAS1 domain 23 167 IPR036378 -
Lja5g2792 285 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 262 - -
Lja5g2792 285 Pfam Fasciclin domain 34 121 IPR000782 -
Lja5g2792 285 ProSiteProfiles FAS1/BIgH3 domain profile. 23 169 IPR000782 -
Lja5g2792 285 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2792 Lja-Chr5 55195764 55196621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2792 - - gmx:100798739 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2792 5 55195764 55196621 Lja5g2792 5 55195764 55196621 ECH