Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2687 ATGAAGCTACACACGAAACCCATTTCCAGTCCTGGTCGAACGGAGAAGTTCCCACCGCCATTGATGAGGTTCTTGAGAACCAGCACAGGGAGCAGAAGCAGAGGAAGGTCAAGGTCTTCAAGCAGCACTGTCTTCCTCAGGAAGAAGAACAACACTGTGATTGAAGCACTAGAACCCTCTTCACCTAAAGTCACTTGCATGGGACAAGTGCGAGCTAGAAGGTCACGACCCTCATCCTCCTCCGCCGGAGCTCCGACCAGTTCCCCCCGCCGCTGCTGCTGCTGTTGGTTCCCACATGCTCTGTTTTGCGGCATTTTTAAGACCAAACCTGGTTCTTGCTGCCAATGCAAACCGGTTCAGCCCAATTGGAGATTCTTCTGCTTCTTCCGGAGAAGGAAAAAGGAAGAAGCTTCAACGAAAAAAACCGGGTCAAGTTTCAGTGACAGTGAAAACGACGAGTCAGAAAACGATGAATCAGAAATTGAAAACAGAGTAAAAGCCAACGCGTTTGTCTGTAACTCTTCTTGTTCTACCACGCCACCGAGAAACGCTTTGTTGTTAACGAGATGCAGATCAGCACCTTATCGTTCTTCATCTCTAGCTTGTAGATTCTGGGGTTCTCCGTTAAGGAACGAAGAAGAAGGAGAAGGAGAAGAAACAGAGCATGAAAACAGAGTACCCTCTGAGACCCAGAGACCCAGTGAGAGTGATTCCGTTGAAGGGATGAACAAAGACCAAAAGATGGAGGAAAAGTTGCGATTCTTCAAAGAGCTTGAAGATTCGTTCAGAGAGAGATTAAAGGAGTCAGAAAAGGTTCATGAATTGAAGAGAAGAGACCAAGAAGAAGAAGAAGAAGATGAAACAGAGGGTGATTCTGCTAAGCCACTGGTTCTTACACGGTGCAAATCGGAGCCGGCGAGAATCGCCGCACAGAAACTTGAACCTGAGGTAAAGGATTTCAGGGAAAAAGACAAGTTTGGGTTTTGCTGA 990 0.4717 MKLHTKPISSPGRTEKFPPPLMRFLRTSTGSRSRGRSRSSSSTVFLRKKNNTVIEALEPSSPKVTCMGQVRARRSRPSSSSAGAPTSSPRRCCCCWFPHALFCGIFKTKPGSCCQCKPVQPNWRFFCFFRRRKKEEASTKKTGSSFSDSENDESENDESEIENRVKANAFVCNSSCSTTPPRNALLLTRCRSAPYRSSSLACRFWGSPLRNEEEGEGEETEHENRVPSETQRPSESDSVEGMNKDQKMEEKLRFFKELEDSFRERLKESEKVHELKRRDQEEEEEDETEGDSAKPLVLTRCKSEPARIAAQKLEPEVKDFREKDKFGFC* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2687 329 MobiDBLite consensus disorder prediction 211 248 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 72 87 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 138 160 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 266 280 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 26 44 - -
Lja5g2687 329 Coils Coil 263 283 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 1 44 - -
Lja5g2687 329 PANTHER PROTAMINE P1 FAMILY PROTEIN 1 325 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 211 230 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 266 299 - -
Lja5g2687 329 MobiDBLite consensus disorder prediction 67 89 - -
Lja5g2687 329 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 1 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2687 Lja-Chr5 53516465 53517950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2687 - - aprc:113873451 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2687 5 53516465 53517950 Lja5g2687 5 53516465 53517950 ECH
Lja1g0875 1 8608862 8609800 Lja5g2687 5 53516465 53517950 PCT