Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2544 ATGAAGGGTGACGCGGTGAGTGGGACATGGCTCAGTGGTTTATGGCCAGTCTCCAGCAAGAGTGCTTCAGATGACAAGGAAGCAATTGGAATTTTGGCATTTGAAGTTGCTGGCTTGATGTATAAGGTGGTTAGTTTATGGCATTCTTTGAGTGACAGGGAGGTGATGAGTCTGAGGGAATGGATAGCAAACTCGGTTGGGGTTAAAATGCTGGTGTCGGACGATGATTGTTTCTTGATGGAGCTTGCATTGAATGAGATACTCGATGAGTTTGAATCTCTTGCAAGGTCTGTGGCCAGGTTGGGTAAGAGGTGCAAGAATCCATTGTATCATGGTTATGAAAATTTTGTCCGCAACCCGTTTGAAAATTATCCTCAATGGGCTGGATGGGAATACAGATGGAAAAAGATGGAGAGGAAGGTGAAGAAAATGGAAAGATTTGCGGCTGCCATGTCACAGTTGTCACAAGAGCTTGAGGTGCTAGCAGAGCGCGATCAAACTTTCAGGAGAATGAAGGCGAATCCTGAGTCGAAACAGGCAAAATTGCTTGAGTTTCAGAAGAGGGTCATGTGGCAGCGCCAGCAAGTGAACAATCTGAGAGACATGTCTCCTTGGAATAGAAGTTATGACTATATTGTTCGATTGCTAGCGAGGTCATTGTTTACAATTCTCGAGAGAATCACACTTGTGTTTGGAATTGGAAACAGTCATGTTCCAATTGAAAAGCAACAATATGATTCACCGTTTATGAATTCTAATAGCCATCATTCACGCAACCATTCATTACCTGCTCTCATGCTTTCGTCTGTTCATCCTTCTGAGACTAATCCTAATCCATATGGATCATGTTCAGAACTTGTTGGGAGCAAGCCACTGTTGAGCTCAGAGAAGAGCAAAAGAAAGAAGAAAGAGATGCAATTGACTCATACACAAAGTGTTAAGCACCTGCATTCAGAAAACAAGCATTTGAAGCATTCTGGGTCCTTTAAAGGGTGCATGCCAACTAATGGTGGTTCCATGAGGTTGATTGATTGTCAAGTGAAAAATATCAATGACATGAAAACAGTGGATAAGTTCTCTCTTAGAGTGCACTTTAAACTATCCCTCAAGGGTCGGTTAAGGCCAGGTACATCTACCCTTGGTGATGCTGCTTTAGCTCTTCATTATGCAAATGTGATTGTGTTGATAGAGAAGATAGTTTCAGCACCTCATCCTATTGATCTTCAAATCAGAGATGATCTTTACAATATGTTACCAACCACTATAAGAACCGCTCTGAGGACTAAGCTTAAATGGTACGCGAAAAGCAAAGTTCATGATGCTAGCCTTGCAGCAGAATGGAGTGTAGTGCTCTCACAGATATTGGAATGGTTGGCTCCATTGGCACACAACATGGTAAGGTGGCATTGTGAGAGGAATTTTGAGAAGGAGCATGATACTTTGAAAGCCAGTGTTTTGCTTGTCCAGACTCTTTACTTTGCGAGCCAACCGAAAACTGAAGCTGCAATGGTTGAGCTGCTTGTTGGTCTGCAGTATGTATGGAGGATTGATAGAGAAGCTAGCATGAGAGATGCATCGGATTTTGCAGGCTCTAGATCCTTTAAACGTGTTCGTTAA 1617 0.4273 MKGDAVSGTWLSGLWPVSSKSASDDKEAIGILAFEVAGLMYKVVSLWHSLSDREVMSLREWIANSVGVKMLVSDDDCFLMELALNEILDEFESLARSVARLGKRCKNPLYHGYENFVRNPFENYPQWAGWEYRWKKMERKVKKMERFAAAMSQLSQELEVLAERDQTFRRMKANPESKQAKLLEFQKRVMWQRQQVNNLRDMSPWNRSYDYIVRLLARSLFTILERITLVFGIGNSHVPIEKQQYDSPFMNSNSHHSRNHSLPALMLSSVHPSETNPNPYGSCSELVGSKPLLSSEKSKRKKKEMQLTHTQSVKHLHSENKHLKHSGSFKGCMPTNGGSMRLIDCQVKNINDMKTVDKFSLRVHFKLSLKGRLRPGTSTLGDAALALHYANVIVLIEKIVSAPHPIDLQIRDDLYNMLPTTIRTALRTKLKWYAKSKVHDASLAAEWSVVLSQILEWLAPLAHNMVRWHCERNFEKEHDTLKASVLLVQTLYFASQPKTEAAMVELLVGLQYVWRIDREASMRDASDFAGSRSFKRVR* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2544 538 Coils Coil 137 164 - -
Lja5g2544 538 Pfam Protein of unknown function (DUF668) 379 467 IPR007700 GO:0045927
Lja5g2544 538 PANTHER PLANT/T32M21-140 PROTEIN 4 537 - -
Lja5g2544 538 MobiDBLite consensus disorder prediction 294 328 - -
Lja5g2544 538 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Lja5g2544 538 PANTHER BNAC09G50660D PROTEIN 4 537 - -
Lja5g2544 538 MobiDBLite consensus disorder prediction 294 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2544 Lja-Chr5 50047603 50050323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2544 - - gmx:100804666 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2544 5 50047603 50050323 Lja5g2544 5 50047603 50050323 ECH
Lja1g0753 1 7322690 7324999 Lja5g2544 5 50047603 50050323 PCT