Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2387 ATGTCGAAGAAAGTTGTTCTCCGGCCGACGGTATCATCAACTCACCGGCGGCAACCGCTCCTACGGCAAAGCAAGAGTTCCGGCAGGGCGGTGACGCAGCTGGGGGAGGCGGTGGGAGGAGCAGCCGCTGTATGCTGCTGCTGCCCCTTCGGCCTCGCCAACCTCATGTACCTGGCGATCTACAAGGTACCAGCCAGCCTGTGTCAGCGGGCGCTGAAGAAGACGAAGCAGCGCCGCCGACGGCACCACCTTCCCACCGCAGGGGAGGAGGTGGTGTTTCCTCAGACGCGGCGCTGCACGTGCGCTTGCTGCGATGACTTTAGCGCCCGTGTCTACCCAGCGTGCGGATCGCTTGATGATGTGGCAGGCATGATGGGCAGTGGTTTGGAGGAGAAAGAAGACAATAAGGAGCTTATGGAGTTGGAGAAGGAGATGTGGGACCGGTTTTATAGCACTGGATTTTGGAGAAGCCCTTCACAAAGAGATGACTCTTTCTTATCATCAACAACACAATCACAAGTTTCTTCTGTTTCCAATCTTCAGGTTCTTGCTGTATAA 558 0.5627 MSKKVVLRPTVSSTHRRQPLLRQSKSSGRAVTQLGEAVGGAAAVCCCCPFGLANLMYLAIYKVPASLCQRALKKTKQRRRRHHLPTAGEEVVFPQTRRCTCACCDDFSARVYPACGSLDDVAGMMGSGLEEKEDNKELMELEKEMWDRFYSTGFWRSPSQRDDSFLSSTTQSQVSSVSNLQVLAV* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2387 185 MobiDBLite consensus disorder prediction 1 26 - -
Lja5g2387 185 PANTHER - 1 184 - -
Lja5g2387 185 PANTHER EXPRESSED PROTEIN 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2387 Lja-Chr5 45344965 45346193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2387 - - cam:101495448 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2387 5 45344965 45346193 Lja5g2387 5 45344965 45346193 ECH
Lja1g0612 1 5624510 5625819 Lja5g2387 5 45344965 45346193 PCT