Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2089 ATGGACAACTTGTTTCGCCTTGTTGATCATGAAGACACGCTCTCAAACCGTTGCATTTGGGTCAATGGCCCCATAATCGTAGGAGCAGGTCCATCAGGGCTAGCCACAGCAGCATGCCTTAGAGAACAAGGGGTACCCTTCATGGTTCTCGAAAGAGCAGATTGCATAGCCTCATTGTGGCAAAAACGCACCTACGACAGGCTCAAGCTTCACCTTCCAAAACAGTTCTGCCAGCTCCCCAACCTCCCATTCCCACAAGACTTTCCTGAATACCCCACCAAGAAACAGTTCATAGACTACCTCGAATTATACGCAAAGCGCTTCGAGATCAACCCTCGCTTTAACGAGTCCGTACAGACCGCTAGCTACGATCAGACTAGCGGTCTGTGGCGGGTTAAGACCACCAGTGGCCACCCCGGCTCCACCAGCTGCAACGAGATCGAGTACGTTTGCAGGTGGCTCGTGGTGGCCACTGGTGAAAATGCGGAATGCGTGGTGCCTGAGATTGAAGGGTTGAGTGAGTTTAAAGGTGATGTCATCCATGCTTGTGACTACAAAACAGGGGAAAGCTTCAGGGGAAAGAAAGTGCTTGTCGTTGGTTGTGGTAACTCTGGAATGGAGCTTTCTCTTGACCTTTGCAACCACAATGCATCACCCAAAATTGTAGTTCGTAGCTCGGTTCATGTGTTACCTAGAGAAATTTTTGGGAAATCGACGTTTGAATTGGCAGTGATGATGATGCAATGGCTTCCACTTTGGCTCGCTGATAAGATTCTATTGATTTTGGCATGGTTGGTTCTGGGTAGCGTCGCGAAGTACGGGCTTAAAAGGCCATTGGAGGGTCCATTGGAGCTGAAGAACAAACAGGGGAAAACCCCTGTTTTGGACATTGGTACCTTGGCGAAAATCAGATCCGGTGAGATAAAAGTTGTACCGGGAATTAAGAGGTTCAACAATGGCGAAGTTGAGCTTGTTAATGGTGAAAAGCATGATGTTGATGCAGTGGTTCTTGCAACCGGTTACCGCAGCAATGTCCCTTCTTGGCTCAAGGAAGGTGAATTTTTCTCTAAGAATGGATTCCCAAAGTCACCATTTCCTAATGGTTGGAAAGGAAATGGTGGGCTTTATGCCGTTGGATTCACAAAGAGAGGGCTCTCTGGTGCTTCATCTGATGCTATCAAAATTTCTCAAGATATTGGCCAAGTCTGGAAAAGAGAGACTAAGCAAAGGAAACAGTGCACCATCACTGCTTGCCAAAGACGTTGCATTTCCCAGTTCTGA 1281 0.477 MDNLFRLVDHEDTLSNRCIWVNGPIIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPNLPFPQDFPEYPTKKQFIDYLELYAKRFEINPRFNESVQTASYDQTSGLWRVKTTSGHPGSTSCNEIEYVCRWLVVATGENAECVVPEIEGLSEFKGDVIHACDYKTGESFRGKKVLVVGCGNSGMELSLDLCNHNASPKIVVRSSVHVLPREIFGKSTFELAVMMMQWLPLWLADKILLILAWLVLGSVAKYGLKRPLEGPLELKNKQGKTPVLDIGTLAKIRSGEIKVVPGIKRFNNGEVELVNGEKHDVDAVVLATGYRSNVPSWLKEGEFFSKNGFPKSPFPNGWKGNGGLYAVGFTKRGLSGASSDAIKISQDIGQVWKRETKQRKQCTITACQRRCISQF* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2089 426 Pfam Flavin-binding monooxygenase-like 26 346 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja5g2089 426 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Lja5g2089 426 PRINTS FAD-dependent pyridine nucleotide reductase signature 195 213 - -
Lja5g2089 426 SUPERFAMILY FAD/NAD(P)-binding domain 25 229 IPR036188 -
Lja5g2089 426 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 11 424 - -
Lja5g2089 426 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 11 424 - -
Lja5g2089 426 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 188 361 IPR036291 -
Lja5g2089 426 Gene3D - 24 409 IPR036188 -
Lja5g2089 426 PRINTS Pyridine nucleotide disulphide reductase class-II signature 191 215 - -
Lja5g2089 426 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2089 Lja-Chr5 28232909 28235212 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2089 K11816 - gmx:100796169 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2089 5 28232909 28235212 Lja5g2089 5 28232909 28235212 ECH