Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2066 ATGGGTCATCACAGCCGCCGCGAGTCCTACCCTGGCACGTCATCGTCCCGCGTTGACTACTATCTCCACACCGGCTCGCGCCGTCTCGATGCGGTGCCCGCCGGTGAGGATCTCCCGTGGCCGTTCCAGAAGCTGGACGGCCTCGGCGCTGACGAGGTCAGGGAGACCGCGTATGAGATATTCTTCACCTCGTGCCGGTCTGCGCCGGGGTTCGGCGGCCGTAACGCGCTCACGTTTTACTCCAACCACGACGGCAATGGCGGCGGCAGCGATGGGGGGAAGCCGAACCAGGTGGTGACGAAACCGACCAGCAGGGTCAAGAAGGCGTTGGGGTTGAAGATGATCAAGAGGTCGCCGTCGCGGAGGATGGCCAGCGCCAGCGTGGTTTCCACGCCGTCGTCTCCGGTGGCCGGAGCTGCCAGCCCAATATCGCACACCGTGCCTCTGCCTTTCCGGCCCCGCCGTCCCATGACCGCCGCGGAGATCATGAGACAGCAGATGAGGGTCACGGAGCACGACGATAACCGGCTGCGCAAGACCCTCATGAGAACCCTTGTTGGCCAAATGGGAAGGCGAGCAGACACTATAATTCTACCATTGGAACTGCTGCGCCATCTAAAGCCTTCAGAATTCAGTGATTCCCAAGAGTACCACAATTGGCAGAAGAGACAGCTCAAGATTCTTGAAGCAGGGCTTCTCCTGAACCCATCAATCCCTTTAGATAAGAGCAACACATTCGCCACGCGCCTCAGGGACATTATAACCAGTTCTGAGTCCAAACCAATTGACATTGGCAAAAACTCAGACACCATGAGGACACTTTGCAATTCTGTGGTTTCCTTGTCATGGAGAAGCCACAATGGCACTCCCACTGATGTATGCCACTGGGCTGATGGATTCCCTTTCAACATTCACCTCTACACTTCCCTTCTTCAGTCGATATTTGACATCAGGGATGACACATTAGTCCTTGATGAAGTTGATGAGCTTCTTGAACTGATGAAGAAAACATGGACAACATTGGGGATCACATTGCCAATTCACAATGTGTGCTTCACCTGGGTGCTGTTTCAGCAGTACATAGCAACTGGGCAGATAGAGCCTGACCTTCTTTGTGCCTCACATGCCATGTTGGGTGAGGTAGCAAATGATGCTAAGAGAGAAAAGGAGTCTTTGTATGTTAAGATTCTGTCATCAGTGCTGACCTCAATGCAGAGTTGGGATGAGAGGAGGTTGCTTAGTTACCATGACTATTTCCTCAGAGGGAATGTTGGCCAAATTGAAAGCCTTCTTCCTTTGGTGTTGTTAGCCTCAAGAATTTCTGGTGAAGATCTTTCAATCACAGATGGTGAAAAGGGAGAGAAAGGAGACATAACTATAGTGGATTCATCCGGTGACCGGGTTGATAATTACATTCGTTCTTCCCTCAAAAATGCATTTGACAAGGTATTAGAGGCAGTGAACTCCAAGTCTGCTGCGTTTGAAAGAAACAAAGAGTTGAGTGAAGTCCTGCTTCAATTAGCTCAGGAAACTGAAGTTTTGGTGATGAAGGAAAGGCATCATTTTAGTCCAATTCTGAAGAAATGGCACTCAACTGCAGGTGCAGTTGCAGCCATAACGCTTCACAATTGCTATGGGCAAGTGCTGAGGCAGTACATAGGTGAAGTGACCTCACTCACAACAGAATCAGTTCAGGTATTGCAGAGAGCTGGGAAGCTAGAAAAGCTGATTGTCCAAATTGTGGTTGAAGACTCCACCGAGTGTGAGGATGGTGGCAAAAATGTTGTGAGAGAGATGGCTCCATTTGATGTTGATTCTGTCATATTGAGTCTTCTGGGAAAATGGATTGATGAATCATTGAACAAAGGCAAAGAGTGTCTGCAAAGGGCAAAAGAGACTGAAACATGGAATCCAAAGTCCAAAACAGAGCCATATGCACAATCAGCTGCGGAGCTGATGAAATTGGCCACTACAACTGCAGAAGAATTCTTCCAAGTTCCAATAGCAATTACAGAAGATTTAGTTCAAGATCTTGCTGATGGATTGGAAAACCTCTTCCTGGACTACATGAAGTTTGTTGCAGCATGTGGTTCAAGACAGAGTTACATTCCCATGCTTCCCCCACTAACCAGATGCAACCGTGACTCAAAGTTCACCAAGCTGTGGAAGAAAGCTGCTCCATGTGGCGCTAATTTTCAAGACCTGCATCACATGAAGGGGGCATTTGAAGGCCACCATCCTCGGTCCTCAACTAGCCGCGGAACGCAACGCCTCTACGTTCGTCTCAACACCTTGCACTACCTCCTCACTCACATCCACTCCCTTGAAAAATCGATCTCCATGAACCCGGGCATTGTCCCTTCAAACCGCCTCCGCTTCGCAAACAACCGCAGGGCTCAAAGCAATTCCTACTTCGAAAGTGTCAACCTCTCCATTCTAGCAGCATGCCAACATGTCTCAGAAGTTGCAGCATACCGTCTCATATTCCTTGACTCAAGCTTTGTCTTCTACGACAGCCTCTATGTCGGTCGTGTTCAAAGGGGTCAGATTAAGCCTGCACTGAAAGTCCTCAAGCAGAATCTCTCACTGATGACCACAATTCTAACAGATAGAGCTCAACCATTGGCAATGAAGGAAGTCATGAAGGCCTCTTTTGATGCACTCCTCATGGTCTTGCTTGCCGGTGGACATTCCCGCATGTTCCACCGGTCGGATCACGAGATAATCTATGAAGATTTTGAGCACCTGAAGCGGGTTTTCAGCAACTGTGTGGATGGGTTGATTGCAGATAATGTGGTGGATGGTGAGGCTGCAGTGGTGGAGGGAGTTATTGCATTAATGGGGCAAAACACTGAGCAGTTGATGGAGGATTTCAGCATTGTCACATGTGAATCAAGTGGGATTGGCATCATGGGTAATGGACAGAAATTGCCAATGCCTCCTACTACAGGGAAGTGGAATAGAGCAGACCCTAACACAATATTGAGGGTGCTTTGCTATAGAAATGACAGAGCTGCCGATCAGTTCTTAAAGAGAACATTCCAATTAGCAAAGAGGAGATGA 3063 0.4904 MGHHSRRESYPGTSSSRVDYYLHTGSRRLDAVPAGEDLPWPFQKLDGLGADEVRETAYEIFFTSCRSAPGFGGRNALTFYSNHDGNGGGSDGGKPNQVVTKPTSRVKKALGLKMIKRSPSRRMASASVVSTPSSPVAGAASPISHTVPLPFRPRRPMTAAEIMRQQMRVTEHDDNRLRKTLMRTLVGQMGRRADTIILPLELLRHLKPSEFSDSQEYHNWQKRQLKILEAGLLLNPSIPLDKSNTFATRLRDIITSSESKPIDIGKNSDTMRTLCNSVVSLSWRSHNGTPTDVCHWADGFPFNIHLYTSLLQSIFDIRDDTLVLDEVDELLELMKKTWTTLGITLPIHNVCFTWVLFQQYIATGQIEPDLLCASHAMLGEVANDAKREKESLYVKILSSVLTSMQSWDERRLLSYHDYFLRGNVGQIESLLPLVLLASRISGEDLSITDGEKGEKGDITIVDSSGDRVDNYIRSSLKNAFDKVLEAVNSKSAAFERNKELSEVLLQLAQETEVLVMKERHHFSPILKKWHSTAGAVAAITLHNCYGQVLRQYIGEVTSLTTESVQVLQRAGKLEKLIVQIVVEDSTECEDGGKNVVREMAPFDVDSVILSLLGKWIDESLNKGKECLQRAKETETWNPKSKTEPYAQSAAELMKLATTTAEEFFQVPIAITEDLVQDLADGLENLFLDYMKFVAACGSRQSYIPMLPPLTRCNRDSKFTKLWKKAAPCGANFQDLHHMKGAFEGHHPRSSTSRGTQRLYVRLNTLHYLLTHIHSLEKSISMNPGIVPSNRLRFANNRRAQSNSYFESVNLSILAACQHVSEVAAYRLIFLDSSFVFYDSLYVGRVQRGQIKPALKVLKQNLSLMTTILTDRAQPLAMKEVMKASFDALLMVLLAGGHSRMFHRSDHEIIYEDFEHLKRVFSNCVDGLIADNVVDGEAAVVEGVIALMGQNTEQLMEDFSIVTCESSGIGIMGNGQKLPMPPTTGKWNRADPNTILRVLCYRNDRAADQFLKRTFQLAKRR* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2066 1020 MobiDBLite consensus disorder prediction 121 141 - -
Lja5g2066 1020 PANTHER DUF810 FAMILY PROTEIN 1 1020 - -
Lja5g2066 1020 MobiDBLite consensus disorder prediction 123 140 - -
Lja5g2066 1020 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 564 706 IPR014770 -
Lja5g2066 1020 PANTHER PROTEIN UNC-13 HOMOLOG 1 1020 IPR008528 -
Lja5g2066 1020 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 847 958 IPR014772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2066 Lja-Chr5 27379681 27383988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2066 - - gmx:100800571 1612.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2066 5 27379681 27383988 Lja5g2066 5 27379681 27383988 ECH