Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1632 ATGTCAACCGTTATCTTCCCTTACAGTTACAGTTACAGTTACAGTTACAGTCTCACACGTGTCCCATTCAAACTCAACCGCTCATCTCCTCGAACAATAACCGTTCGCGCCGCGGCAGTTTCAGCTCCGGCGGAGAAGCGAACCAGGAAGAAGAAGCAGCCGAAGGATGACGACACTGCGCTCGAGAACGGCCTCCGCTTCAGCTTCATGGAGGAGCTCATGAACCGCGCCAGGAACCGTGACTCCGCCGCCGTCTCCGAACTCATCTACGACATGATTGCCGCCGGCCTCAACCCTGGCCCTAGGTCGTTTCATGGCTTGGTTGTGTCGTACGCTCTCAACGGCGACGAACAAGCTGCGATGGATTCGCTGAGGAGGGAGCTCGGTGCGGGGCTTCGACCGGTTCACGAGACGTTTGTGGCGTTGGTGAGGTTGTTTGGCTCTAAAGGGAGTGCTACTAGAGGGCTGGAAATACTTGCAGCCATGGAGAAGCTAAATTATGATATTAGACAAGCTTGGCTTATTCTAATTGAGGAACTTGTTCGGAACAAGTATTTGGAGGATGCCAACAAAGTATTCATGAAAGGTTCTAAGGGGGGCCTTAGGGCCACTAATGAGATTTATGATCTTCTAATTGAGGAAGACTGCAAAGTTGGTGACCATTCTAATGCCTTAGATATTTCCTATGAGATGGAGGCAGCTGGCCGGATGGCAACCACGTTCCATTTCAATTGCCTCCTTTCTGTGCAGGCTACCTGCGGAATACCTGAAGTAGCTTTTGCAACATTTGAGAATATGGAATATGGAGAAGATTTTATGAAGCCTGATACAGAGACATATAATTGGGTTATTCAAGCATATACTAGAGCTGAATCTTATGACAGAGTACAAGATGTTGCTGAGTTGCTTGGCATGATGGTTGAAGATTATAAGCGCATACAGCCCAATGTGAAGACCCATGCGCTGTTAGTGGAGTGTTTTACCAAGTACTGTGTAGTACGAGAAGCTATTAGGCATTTCCGTGCACTTATAAACTTTGAAGGGGGTATAAAAGCTCTACATAATGGAGGGAACTATGGAGATCCTCTTTCTTTGTACCTTCGGGCGTTATGTCGGGAAGGAAGGATTGTCGAATTGCTTGAAGCTTTAGAAGCTATGGCCAAAGATAACCATCCAATCCCCCCACGGGCAATGATCTTGAGCAGAAAATACCGGACATTGGTGAGCTCATGGATTGAACCTTTACAAGAGGAGGCTGAACTTGGTTATGAGATTGATTATATTGCTAGATACGTTGAAGAGGGTGGCCTTACCGGTGAGCGCAAGCGGTGGGTGCCGCGAAGTGGTAAAACACCTCTAGATCCTGATTGCGATGGATTTATATATTCAAACCCAATGGAAACCTCCTTCAAACAAAGATGCGTTGAAGAGCTGAAGTTGCACCATAAAAAGGTTTTGAAAAACTTGCAATTTGAAGGACTTGCAGCTTTAGGGGATGGCGTATCCGAATCTGATTATATTAGAGTGCTGGAGAGGCTAAAGAAACTAATAAAAGGGCCTGAACAGAATGTTTTAAAGCCTAAGGCTGCTAGTAAAATGGTTGTGTCCGAATTGAAGGAAGAACTAGAAGCTCAAGGTTTACCGATTGATGGGACAAGAAATGTTCTTTACCAGCGTGTACAGAAAGCAAGGAGGATAAACCAATCTCGTGGTCGGCCCCTTTGGGTTCCTCCTGTGGAAGAAGAGGAAGAAGAGGTAGATGAAGAGCTAGATGCATTAATTTCACGTGTAAAGCTGGAGGAAGGAAATACAGAGTTCTGGAAACGTCGCTTCCTAGGGGAAGGCTTAACTAGTGATCATGGAAAGCCAATGGATGCTGGTACATCAGAGTCCCCTGAAGTTCAAGATGATGTTGATGATATAGAGGATGCTGCGAAAGAGGTTGAAGATGATGAAGCAGATGATGATGGTGAGGAAGCAGAACAGGCTGAAGAGGAAGTAGAACCAGTAGAGAACCAAGATGTAGACAGGGTAAAGGACAAGGAAGTTGAAGCTAAAAAGCCCCTTCAAATGATTGGAGTCCAGTTGTTGAAAGATTCTAACCAGCCCACTGCCACATCTAAAAAGTATAAAAGAAGATCTCGAGTGCAGGCTGAGAATGATGATGATGATGATTGGTTTCCTTTGGACATATTTGAGGCATTTGAGGAAATGAGGAAGCGGAAAGTGTTTGATGTATCAGACATGTATACCTTAGCAGATGCTTGGGGATGGACATGGGAGAGAGAACTGAAGAACAAACCTCCCCGTAGATGGTCACAGGAGCGGGAAGTTGAGTTGGCAATTAAAGTTATGCAGAAGGTCATAGAATTAGGAGGGGCACCAACTATAGGAGATTGTGCCGTGATCTTGCGTGCAGCTATAAGAGCACCTCTACCTTCAGCTTTCTTGACGATTTTACAGACAACTCATGGTCTTGGTTATAAGTTCGGGAGACCACTCTATGATGAGGTCATCTCTCTCTGCGTTGATATTGGGGAACTAGATGCAGCTGTTGCCGTAGTTGCAGAGTTGGAGACCACCGGGATCTCGGTTTCAGACCAGATTTTGGATAGGGTAATTTCTGCTAAGCAGAAAATTGACGACCCTTCCAGTGGTGACATTATAGATGTGGAATTGTAA 2682 0.4571 MSTVIFPYSYSYSYSYSLTRVPFKLNRSSPRTITVRAAAVSAPAEKRTRKKKQPKDDDTALENGLRFSFMEELMNRARNRDSAAVSELIYDMIAAGLNPGPRSFHGLVVSYALNGDEQAAMDSLRRELGAGLRPVHETFVALVRLFGSKGSATRGLEILAAMEKLNYDIRQAWLILIEELVRNKYLEDANKVFMKGSKGGLRATNEIYDLLIEEDCKVGDHSNALDISYEMEAAGRMATTFHFNCLLSVQATCGIPEVAFATFENMEYGEDFMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDYKRIQPNVKTHALLVECFTKYCVVREAIRHFRALINFEGGIKALHNGGNYGDPLSLYLRALCREGRIVELLEALEAMAKDNHPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLTGERKRWVPRSGKTPLDPDCDGFIYSNPMETSFKQRCVEELKLHHKKVLKNLQFEGLAALGDGVSESDYIRVLERLKKLIKGPEQNVLKPKAASKMVVSELKEELEAQGLPIDGTRNVLYQRVQKARRINQSRGRPLWVPPVEEEEEEVDEELDALISRVKLEEGNTEFWKRRFLGEGLTSDHGKPMDAGTSESPEVQDDVDDIEDAAKEVEDDEADDDGEEAEQAEEEVEPVENQDVDRVKDKEVEAKKPLQMIGVQLLKDSNQPTATSKKYKRRSRVQAENDDDDDWFPLDIFEAFEEMRKRKVFDVSDMYTLADAWGWTWERELKNKPPRRWSQEREVELAIKVMQKVIELGGAPTIGDCAVILRAAIRAPLPSAFLTILQTTHGLGYKFGRPLYDEVISLCVDIGELDAAVAVVAELETTGISVSDQILDRVISAKQKIDDPSSGDIIDVEL* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1632 893 MobiDBLite consensus disorder prediction 632 671 - -
Lja5g1632 893 MobiDBLite consensus disorder prediction 615 675 - -
Lja5g1632 893 Gene3D SAP domain 517 573 IPR036361 -
Lja5g1632 893 Gene3D Tetratricopeptide repeat domain 40 171 IPR011990 GO:0005515
Lja5g1632 893 MobiDBLite consensus disorder prediction 43 59 - -
Lja5g1632 893 PANTHER - 35 813 - -
Lja5g1632 893 SMART sap_9 530 564 IPR003034 -
Lja5g1632 893 Gene3D Tetratricopeptide repeat domain 728 886 IPR011990 GO:0005515
Lja5g1632 893 MobiDBLite consensus disorder prediction 700 720 - -
Lja5g1632 893 Pfam SAP domain 531 563 IPR003034 -
Lja5g1632 893 MobiDBLite consensus disorder prediction 38 59 - -
Lja5g1632 893 ProSiteProfiles SAP motif profile. 530 564 IPR003034 -
Lja5g1632 893 SUPERFAMILY SAP domain 530 567 IPR036361 -
Lja5g1632 893 Coils Coil 646 673 - -
Lja5g1632 893 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE 3 35 813 - -
Lja5g1632 893 Gene3D Tetratricopeptide repeat domain 173 453 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1632 77 332 Glycosyltransferase AT1G05670 22.957 5.17e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1632 - - gmx:100807191 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1632 5 17520858 17530735 Lja5g1632 5 17520858 17530735 ECH