Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1631 ATGGCTAGCTTTATGTTCTTTACGTCATACATGGTTTTGTGTCTAATCACGGCACTAGCAAGCTGTTTTGGTGGTGCAGATGCAGCCCGTGCATTCTTTGTGTTCGGCGATTCGCTCGTCGATAATGGCAACAACAATTACTTGTCCACCACAGCTCGAGCAGACAGTCTGCCTTATGGCATTGATTATCCAACTCACAGACCCACTGGCCGTTTCTCTAATGGCTTCAACATTCCTGACTTCATCAGTCAAGAACTTGGATCAGATCCCACTTTGCCATATTTGAGTCCTGAGCTCCAGGGTGAAAGATTGCTTGTTGGTGCCAACTTTGCTTCTGCTGGCATTGGAATACTTAATGATACTGGAGTCCAATTTGTAAACATCATCAGAATGTCAAGACAGCTAGAAAACTTCCAGGAATACCAGGAAAGGGTGAGTGCTATCATTGGAGAAGAGGAAACTCAGCGATTAGTAAATGGAGCACTAGTCCTCATCACATGTGGAGGCAACGATTTTGTGAACAACTACTACTTGGTGCCTGTCTCCGCAAGATCCCAACAATTCGCTTTGCCAGATTATGTCAAGTACTTGATCTCTGAATACAAGAAGATTCTACAAAGGCTGTATGTTCTCGGAGCGCGTCGGGTGCTAGTAACCGGAACTGGTCCGTTGGGTTGTGTTCCGGCGGAACTGGCTCTCCGAGGCAGAAATGGTGAATGCTCGCCAGAGCTGCAGCAGGCTGCGTCGTTGTTCAACCCTCAACTTGTTGACATGCTTGGAGAACTCAATACGGAAGTTGGTTCAGATGTGTTCATTGGAGCCAACACACAACAAATGCACGATAATTTCATCAATGATCCTCAAGCATTCGGATTTGTTACTTCAAAAGTAGCATGTTGTGGTCAAGGACCCTATAATGGAATTGGACTGTGCACATTGGCATCCAGCGTATGCCCAAACCGTGATGAATATGCATTTTGGGATCCATTCCATCCATCAGAAAAGGCTAACAAGCTGATTGTTAAGCAGATCATGTCAGGCACCACGGAGTATATGCATCCAATGAATCTCAGCACCATTTTGGCTATGGATTCCAAAAAATTAGATTAA 1110 0.4514 MASFMFFTSYMVLCLITALASCFGGADAARAFFVFGDSLVDNGNNNYLSTTARADSLPYGIDYPTHRPTGRFSNGFNIPDFISQELGSDPTLPYLSPELQGERLLVGANFASAGIGILNDTGVQFVNIIRMSRQLENFQEYQERVSAIIGEEETQRLVNGALVLITCGGNDFVNNYYLVPVSARSQQFALPDYVKYLISEYKKILQRLYVLGARRVLVTGTGPLGCVPAELALRGRNGECSPELQQAASLFNPQLVDMLGELNTEVGSDVFIGANTQQMHDNFINDPQAFGFVTSKVACCGQGPYNGIGLCTLASSVCPNRDEYAFWDPFHPSEKANKLIVKQIMSGTTEYMHPMNLSTILAMDSKKLD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1631 369 SUPERFAMILY SGNH hydrolase 32 351 - -
Lja5g1631 369 CDD SGNH_plant_lipase_like 31 347 IPR035669 -
Lja5g1631 369 Pfam GDSL-like Lipase/Acylhydrolase 33 343 IPR001087 GO:0016788
Lja5g1631 369 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 364 - -
Lja5g1631 369 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 364 - -
Lja5g1631 369 Gene3D SGNH hydrolase 24 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1631 Lja-Chr5 17516550 17519091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1631 31 361 Acyl Lipid Metabolism Gene Families AT4G10950 33.333 1.04e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1631 - - gmx:100807720 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1631 5 17516550 17519091 Lja5g1631 5 17516550 17519091 ECH