Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1629 ATGGCTATTGGTGGGAGAAGAAGGTTCTCCTTTTCTGCTCTTCTTGATCATCATCTTCTCCTTCCAACTTTGTTAATCACCATACTTTTTCAAAGGGCTGTGGCTGATCATGAATCCAATATCTTAAATTACACAAGGCATCGCCAAGTCAGTGGAATGAGACTTGAAAGGATTAGCAGGTACTTGGAGAAGATTAACAAGGCTCCTGTTCTCACCATAGAGAGTCCAGATGGGGATCTCATAGATTGTGTTCACAAAAGAAAACAACTAGCTTTCGATCACCCTCTCTTAAAGAATCATAAGATTCAGAAAGCGCCAACGGAGATGCCAAGAGGGATGAATGTGACAAGAGATGAAAATGGAAACATGGAAGGGGAAGGAGGAAAAGAGAATAGGCCAAAAGAGGCTGTATGGCAAATGTGGCACCGAAATGGAACTTGGTGTCCAAAAGGGACGGTTCCCATACGGCGGAGCACAGTGGATGATGTGTTGAGAGCAAAGTCTTTGTATGAGTTTGGCAAGAAACCGCCAGGAATGCTTCCTCTCTCTCGCCGTACTGCCAATGTCTCCCCTAATGATATATTCAGCAACAATGATCATGAGCATGCAGTCGCTTACACAGGATTGGGATCGGATTCGCCACAAGAGATTTACGGAGCAAAAGCATCAATAAACGTGTGGGAGCCATCTATTCAAGTGATGAACGAGTTCAGCCTCTCACAAATTTGGCTCCTTTCAGGTTTCTTCGATGGTTCTGATCTCAACAGTATCGAAGCTGGGTGGCAGGTCAGTCCACAGATCTATGGTGACAGCAGACCCAGATTGTTCACTTATTGGACGAGTGACTCATATGGGAAAACTGGATGTTACAACCTTCTCTGTTCTGGTTTTGTTCAAATCGATAGCAGGATAGCCATTGGAACTGCAATTTCTCCTCTCTCTTCTTATGCTGGCAACCAATATGAAGTCACCATCCTCATTTGGAAGGATCCAAATGTGGGAAATTGGTGGTTGAGTTATGGTGACAACATATTGGTGGGGTATTGGCCCGCGGAGCTGTTCACGCACCTAGCAGACCACGCCACGGGGGTGGAGTGGGGCGGCGAGGTAGTGAACACACGGGCCAATGATGAACACACGTCCACCCAGATGGGCTCCGGCCACTTTGCCGAGGATGGTTACGGAAAAGCAAGCTACTTCCGGAACATTGAGATTGTGGACGTGACTAACACTCTTAGATCAGTGCAGAACATCACAACAATAGCAGAAACCTCGAACTGTTACAACATTCAGACCTCCTACAGCAAGGAATGGGGCACGTATTTCTACTATGGTGGACCTGGGAAAAATCCACAGTGTCCGTGA 1365 0.4645 MAIGGRRRFSFSALLDHHLLLPTLLITILFQRAVADHESNILNYTRHRQVSGMRLERISRYLEKINKAPVLTIESPDGDLIDCVHKRKQLAFDHPLLKNHKIQKAPTEMPRGMNVTRDENGNMEGEGGKENRPKEAVWQMWHRNGTWCPKGTVPIRRSTVDDVLRAKSLYEFGKKPPGMLPLSRRTANVSPNDIFSNNDHEHAVAYTGLGSDSPQEIYGAKASINVWEPSIQVMNEFSLSQIWLLSGFFDGSDLNSIEAGWQVSPQIYGDSRPRLFTYWTSDSYGKTGCYNLLCSGFVQIDSRIAIGTAISPLSSYAGNQYEVTILIWKDPNVGNWWLSYGDNILVGYWPAELFTHLADHATGVEWGGEVVNTRANDEHTSTQMGSGHFAEDGYGKASYFRNIEIVDVTNTLRSVQNITTIAETSNCYNIQTSYSKEWGTYFYYGGPGKNPQCP* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1629 454 PANTHER CARBOXYL-TERMINAL PEPTIDASE 18 452 - -
Lja5g1629 454 Pfam Neprosin activation peptide 72 206 IPR025521 -
Lja5g1629 454 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 18 452 - -
Lja5g1629 454 Pfam Neprosin 235 447 IPR004314 -
Lja5g1629 454 Gene3D - 228 373 - -
Lja5g1629 454 MobiDBLite consensus disorder prediction 111 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1629 Lja-Chr5 17488230 17491821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1629 - - lja:Lj5g3v1303500.1 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1629 5 17488230 17491821 Lja5g1629 5 17488230 17491821 ECH