Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1590 ATGGATGCTTCCCATTCCACCACCCTCCTCTGCTTCACTCTCTTCCTGTTCCTCCCTTCTTCTCAACCCGTTTCCGATTCCAGCACATTAGTGTACAAATCATGTGCAAGCCAAACCTTCCACAATCCACAATCTCAATATTACTCTCAAACACTCAACTCCCTGTTCCAACAACTAATCGCACAATCCTCCCAATACAAATTCTTCAAAACCAATGAAGCTATCAACGATGAAACAGCCATCATCTCAGGTCTTTTCCAATGCAGAGACGACATGACCAGACAAGATTGTTTCAGCTGCGTAAACTCACTCCCTCACATATCAAACACCTTGTGCGAAAACTCCATACAAGCAAGAATTCAACTTGACGGTTGCTACATTCAATATGAAACAGAGGAAGTAGTTCCAACAGGGGAAACTGAAACTGAACCATCTAAAATCAGCAGTAGCAATCTTCTGCTTCACAAGGAGTGTGGGGAGCCCATTGAGGGGTTAAAAGAGTTGATGGATGAAGCGTTTGTGATCCTGGAGACTGGGATTCTGAAAAGTGATGAATACTACTACACAACGAGTTATGGATCAGTGAAATTGATGGGGCAGTGTGAAGGTGATTCAGGAAATTGTGAGTGTAGTGAATGCGTGAGCGATGCAGTGCATGTTGCTAAGGAAGAATGCAGTGGTTCGATCTCGGCGCAGATATATCTTGGCAAGTGTTTTATCAGCTATGAATACCATCCAGGATCAGATGACTTTCCTCGCAACCCTCTCCCAGGGGCAAGCAGAAACAACAACACTGAAAGGTTAGCAGCTATAGTTGTTGGAGGGGGTGCAGCTTTGTTTCTGGGCTTTATTTTGTTCTCGCTGCTTAACTCTCGACTTAAAAAAGATGATTACGACTACTGA 903 0.4396 MDASHSTTLLCFTLFLFLPSSQPVSDSSTLVYKSCASQTFHNPQSQYYSQTLNSLFQQLIAQSSQYKFFKTNEAINDETAIISGLFQCRDDMTRQDCFSCVNSLPHISNTLCENSIQARIQLDGCYIQYETEEVVPTGETETEPSKISSSNLLLHKECGEPIEGLKELMDEAFVILETGILKSDEYYYTTSYGSVKLMGQCEGDSGNCECSECVSDAVHVAKEECSGSISAQIYLGKCFISYEYHPGSDDFPRNPLPGASRNNNTERLAAIVVGGGAALFLGFILFSLLNSRLKKDDYDY* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1590 300 ProSiteProfiles Gnk2-homologous domain profile. 28 134 IPR002902 -
Lja5g1590 300 ProSiteProfiles Gnk2-homologous domain profile. 147 247 IPR002902 -
Lja5g1590 300 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 298 - -
Lja5g1590 300 Gene3D - 163 246 IPR038408 -
Lja5g1590 300 Gene3D - 26 133 IPR038408 -
Lja5g1590 300 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 7 298 - -
Lja5g1590 300 Pfam Salt stress response/antifungal 192 243 IPR002902 -
Lja5g1590 300 Pfam Salt stress response/antifungal 35 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1590 Lja-Chr5 16976174 16980675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1590 48 267 Receptor kinase-like Gene Family AT4G21230 25.778 6.26e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1590 - - lja:Lj0g3v0196469.1 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1590 5 16976174 16980675 Lja5g1590 5 16976174 16980675 ECH