Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1579 ATGCGCATGCGGTGTTTCCTCCGAACTCCAATCTTCAAAACCCTCGTAACCGTCAACTCTTCAATCTCATTCCTCCCTCCTCCTCACTCGCCAGTAACCGCCAATCTCCGATTCCCAATGGCGGCGGCGGCGGCAATCCACACCGAAGCAGGTCTCGCTCGCCGTTTCTGGATCAAGTTCGCTCGCGAGTCCATCTTCGCCATGTACACTCCCTTCGCCATCTCCTTGGCCTCCGGTAACTTGAAGATTGACTCCTTCCGCCACTACATCGCTCAGGATGTTCATTTCCTCCGCGCTTTTGCTCGAGCGTATGAGTTGGCTGAAGAGTGTACTGATGATGATGATGCAAAGCTTGAATTCTCTGAGTTGAGAAAGGCAGTTTCAGAGGAGATGAAGATGCATCAGTCATTGGTACAGGAATGGGGGTTGGACCTTGCCAAAGAGCATAGCATTAATTCCGCAACAGTTAAGTACACAGACTTCCTGTTGGCTACAGCCTCTGGAAAGATTGAAGGACTAAAAGGTCCTGGTAAATTGGCCACCCCATTTGAGAAAACAAAAATTGCTGCTTATACTTTAGGTGCTGTGACACCTTGCATGAGGCTTTATGCCTTTTTGGGTAAGAAGTTCAAGGAACTTCTGGACTCCAATGAAAGTGCCCATCCGTACAAGAAGTGGATCGACAACTATTCCTCTGATGGTTTCCAGGCTTCTGCTCTGCAAACTGAAGATTTGCTCGACAAAATAAGTGTCTATTTGACTGGCGAAGAACTTGATGTCATTGAAAAGCTTTATTACCAAGCAATGAAGCTTGAAATAGACTTCTTCTCTGCTCAACAACTTTCTCAGCCAACTATTGTACCATTGACTAAAGGCCATAACCCAGCAGAAGATCATCTCATGATTTTTTCTGATTTTGATTTAACATGCACTGTTGTCGATTCATCTGCCATTTTGGCAGAAATTGCTATAGTGACAGCACCAAAATCTGATCAGAATCAGCCTGAAGATCAAATTGTTCGAATGACATCTTCTGATCTCAGGAATACATGGAGTTCTCTATCCAAACAGTATACAGAGGAGTACGAGCAATGCATAGAAAACATTATGCCTGCCAAAAGATTGGACCATTTTGATTATAAAGAACTGTCTATAGCACTGGAGCAACTCTCAAAATTTGAGAATACAGCAAATAATAGGGTTATTGAGTCAGGGGTTCTCAAGGGTATAAATCTAGAAGATATAAAGCGTGCTGGAGAGCGTTTGAACCTTCAAGATGGTTGCACTAACTTCTTTCAGAGGATTGTTAAGAATGAAAATTTGAATGCCAATGTGCATGTTCTTTCATACTGCTGGTGCAGTGACCTCATTAAATCTGCTTTCTCTTCAGCTGATTTAAATGAGTTGAATATTCATGCTAATGACTTCACGTATGAGGGATCTGTTTCGACGGGTGACATTGTTAAGAAGGTGGAGTCTCCCATTGACAAGGTCCAACAATTTCGTAGTATATTGAAAAATTGCAACAATGACAAGAAGAAATTAACTGTTTACATTGGAGACTCATTGGGTGATCTACTTTGTCTACTCGAAGCAGATGTAGGAATTGTGATTGGTTCAAGTTCAAGCCTTAGGACTGTTGGGACGCAATTCGGTGTTTCATTTGTCCCATTGTTTTCTGGCTTGGTTAAGAAACAGAAAGATTACATTGAAGGAAGCTCTTCTAATTGGAAGGGTAAATCTGGCATTCTTTACACAGTCTCTAGTTGGGCTGAAGTGCATGCTTTTATTTTGGGTTGCTAG 1803 0.426 MRMRCFLRTPIFKTLVTVNSSISFLPPPHSPVTANLRFPMAAAAAIHTEAGLARRFWIKFARESIFAMYTPFAISLASGNLKIDSFRHYIAQDVHFLRAFARAYELAEECTDDDDAKLEFSELRKAVSEEMKMHQSLVQEWGLDLAKEHSINSATVKYTDFLLATASGKIEGLKGPGKLATPFEKTKIAAYTLGAVTPCMRLYAFLGKKFKELLDSNESAHPYKKWIDNYSSDGFQASALQTEDLLDKISVYLTGEELDVIEKLYYQAMKLEIDFFSAQQLSQPTIVPLTKGHNPAEDHLMIFSDFDLTCTVVDSSAILAEIAIVTAPKSDQNQPEDQIVRMTSSDLRNTWSSLSKQYTEEYEQCIENIMPAKRLDHFDYKELSIALEQLSKFENTANNRVIESGVLKGINLEDIKRAGERLNLQDGCTNFFQRIVKNENLNANVHVLSYCWCSDLIKSAFSSADLNELNIHANDFTYEGSVSTGDIVKKVESPIDKVQQFRSILKNCNNDKKKLTVYIGDSLGDLLCLLEADVGIVIGSSSSLRTVGTQFGVSFVPLFSGLVKKQKDYIEGSSSNWKGKSGILYTVSSWAEVHAFILGC* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1579 600 PANTHER SI:CH1073-67J19.1-RELATED 39 600 - -
Lja5g1579 600 PANTHER BIFUNCTIONAL TH2 PROTEIN 39 600 - -
Lja5g1579 600 Pfam TENA/THI-4/PQQC family 71 168 IPR004305 -
Lja5g1579 600 Pfam TENA/THI-4/PQQC family 191 278 IPR004305 -
Lja5g1579 600 SUPERFAMILY Heme oxygenase-like 69 277 IPR016084 -
Lja5g1579 600 SUPERFAMILY HAD-like 290 556 IPR036412 -
Lja5g1579 600 CDD TenA_C_AtTH2-like 52 278 - -
Lja5g1579 600 Gene3D - 46 280 IPR016084 -
Lja5g1579 600 Gene3D - 301 551 IPR023214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1579 K22911 - gmx:100788250 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1579 5 16804729 16809949 Lja5g1579 5 16804729 16809949 ECH