Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1339 ATGGGAGGGAACAAGCAAAACAAGTCTTCATCTTTCAGTTCAATTTTCAACATTTTCAAATCTTCTAATAAGAAGCAAAGAGGAGGAAGAGGGTATAATGATGATGATGGGGCAAAGCAATGGACCAAAGTGTGGCCTAGTGATGAGGACAGAGGTAGCTGGGGGGTAGCTGATCCTGTCATTGACATGAGAGCTTCAGCTTTCATTGCTCAGTACAAGAAAAAGATTTCAGAGTCTGAAATTCACTGGCAAGCTCAACCTCAGCAGTAG 270 0.4259 MGGNKQNKSSSFSSIFNIFKSSNKKQRGGRGYNDDDGAKQWTKVWPSDEDRGSWGVADPVIDMRASAFIAQYKKKISESEIHWQAQPQQ* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1339 89 PANTHER OS06G0632400 PROTEIN 1 87 - -
Lja5g1339 89 MobiDBLite consensus disorder prediction 27 46 - -
Lja5g1339 89 MobiDBLite consensus disorder prediction 20 55 - -
Lja5g1339 89 PANTHER RIBOSOMAL PROTEIN S12 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1339 Lja-Chr5 13464441 13464823 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1339 - - mtr:MTR_1g084900 124.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0508 1 4598858 4599238 Lja5g1339 5 13464441 13464823 PCT