Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1207 ATGTCAAGCCAAAGAGGTGAAGAAGATCACGCTGCGGAAGAAGAAAGAGGAAGAAGAACACCCCTTCTTGTTCATGATCATGATTCCTCAATTCTCATTCTTCATCAAAACGAAGACACCATCGTTCCTTTACCACCCGATCATAAACCTTCACCCTCTCTTTCCGTTCCCAGTCAACGCCTCGCTTCTCTCGATGTCTTCCGCGGCTTAACCGTTGCGTTGATGATTTTAGTTGATAATGTGGGAAGAGCTTTTCCATCTTTGAATCATTCTCCATGGTTTGGGCTCACGCTTGCTGATTTTGTGATGCCGTTTTTCCTCTTTGGGGTTGGCGTTTCAATCGCTCTGGTATTCAAGAAAGTCTCTAGCAAACCAAATGCCACAAAGAAAGTCATATCAAGGACAATTAAGCTTTTCCTTTTGGGGCTGTTGCTACAAGGTGGCTATTTCCATGGGCGCGGCCATTTAACTTATGGAGTTGATTTAAGCAAGATACGCTGGCTTGGTGTACTTCAGAGGATAGCTATTGGGTATTTCTTTGCGTCTACATCAGAGATTTGGCTAGTGAACAATAATATTTTGGTTGACTCACCAGCAGCTTATGCGAGGAAATACTCCATTCAGTGGATGTTTTCTATCTTACTTTGCTCAGTGTACCTTTGCTTGCTCTATGCCCTCTATATTCCAGATTGGAAGTTCGAACATTCTAACTTTCTTCGAAATGTTCATTGTGGAGTGAGGGGCAGTCTTGAACCTCCTTGTAATGCTGTGGGATTTATTGATAGATTAATTCTTGGTGAAAATCATATATACCAGCGTCCTGTGTATAGAAGAACAAAGGAGTGCAGTGTTAATTCACCTGATTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGTCTTGCACCATTTGACCCAGAGGGTATATTGAGTTCACTGATGGCTGCCATTACATGTTTCATGGGACTGCAATTTGGGCACATACTTGTAATTTTTCAGGGTCACAAGCAGAGGATACTTCTTTGGTCTGTGTTTTCCTTCTTTCTATTGCTGATTGGATATGTTCTGGAGATTTTAGGAATTCCTTTATCAAAAGCTCTGTACACATTAAGCTACATGTGCGTCACTGCAGGAGCATCAGGCTTGGTCTTGACTGCTATCTATTACATTGTTGACATAGGACATTTTAGAAAGCCTACAGCTTTACTACAATGGATGGGAATGAATGCTCTTATTGTATACGCATTGGCTGCTTGTGATATATTCCCGTTAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAACTTGGTTGATGCCAGTGAAACTTTACTACAGAACGTATTTCATTCTGAAAAGTGGGGTACACTGGCCTTTGTAATAGTTGGGATTTTATTCTGGTGTCTTTTTGCTGGTTTCCTTCACAAGAAAGGGATATATATAAAAATGTAA 1455 0.4131 MSSQRGEEDHAAEEERGRRTPLLVHDHDSSILILHQNEDTIVPLPPDHKPSPSLSVPSQRLASLDVFRGLTVALMILVDNVGRAFPSLNHSPWFGLTLADFVMPFFLFGVGVSIALVFKKVSSKPNATKKVISRTIKLFLLGLLLQGGYFHGRGHLTYGVDLSKIRWLGVLQRIAIGYFFASTSEIWLVNNNILVDSPAAYARKYSIQWMFSILLCSVYLCLLYALYIPDWKFEHSNFLRNVHCGVRGSLEPPCNAVGFIDRLILGENHIYQRPVYRRTKECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFMGLQFGHILVIFQGHKQRILLWSVFSFFLLLIGYVLEILGIPLSKALYTLSYMCVTAGASGLVLTAIYYIVDIGHFRKPTALLQWMGMNALIVYALAACDIFPLVIQGFYWHSPENNLVDASETLLQNVFHSEKWGTLAFVIVGILFWCLFAGFLHKKGIYIKM* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1207 484 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 60 176 IPR012429 -
Lja5g1207 484 MobiDBLite consensus disorder prediction 1 21 - -
Lja5g1207 484 PANTHER OS05G0155700 PROTEIN 14 484 - -
Lja5g1207 484 PANTHER LD22376P 14 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1207 Lja-Chr5 12097879 12102948 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1207 K10532 - gmx:100802361 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0811 1 7901653 7905599 Lja5g1207 5 12097879 12102948 PCT