Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0834 ATGGCAGAAAGTAACAGTAACATCTCAAAACAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGTGGAATTCCAGTATTGACAGTTTTCAAGAACAACTCAATCATCAAGAACATCTTCATCGTACCCAACAAGATCAACAACCACACCCTTGTTCTTGGAAGACACCCAGATTGCAACATAGTCCTCACTCACCCCAGCATCAGTCGCTTCCACCTCAAGATTCTCTCCACCCCTTCTTCTCGCACCCTTTCCCTCGTTGATTTGTCTTCTGTGCATGGAACGTGGGTGTGTGGGAGGAAGCTTGAGCCAGGGGAGAGTGTGGACCTCAAGGAAGGTGACACCTTCACACTTGGGATTTCCACTAGGCTTTATCGTCTCAGCCGGGTTCCCTTTGTTAAGGACCCGAGATCGGATGAGAATTTGAAACTCAGTGTGGAACAAGGGATTCCTGTTTGTTGTGATGAAGAAATGATGAGGAAGGGCCAGTCTAAAGATGAAGATTTTGAAGTTCTGAGAGGAACTGAAACATCATATTTGGCTCCAAACTCTGAAATTGAAGATAAACTGTGTGGCTTTCAAAAACATGTTCTATCCCCACCTTATGTGCAAACTGTTGAGGAATTTGATAACAAGGAGAAAAGTGAAGCTTTACCTGAATTAGAGATGCCTGAGGAAACTAATTTGTTTTGCACATTGAGAGAATATTTGAAACACAACATTTGTCTGCCAGCTGTGGAGTCTGTCAAGGGAACCAATATGAAGCAATTTCAAGGTTCACTCCATACACAACTACCTTCCATTGAAAAGCATTGGCTCAGCTTGCTTTCAAATATTGATCCTGCATATCTTGATGAAGAATGTGATGCTGAAGTGCCTGAAATTCCTAATGAATCTGGATTTGGACGCACACTCAGATATAATGACAATGTTGAAGATGAAGATACTTTCACTACTGGAGCAAGAACTTCCAATTTCGAGAACTCATGTTCGGTACTTGGTAAAGATATTCCTGATTCTAGATTTCCTCAAATCAAGGTTGTTGAGGGAGTTTCAATGGATTCTCCATCCTATGGAGAAGAGCAAGATATATGTTGTAGAAAGTATAAGTCAAAGATGCATGATCCAAATGCTAAATCCTGCCATGAGCAAAGGAATTCACTAGTTGAAGTCCTTGAGGATATTGGAAACAAATGCATTAAATATATAGATCCTGCATCTTTTGATGAAAAAGGGGTCACTGCAGTTACTGTTTTACCTGAAGAATATGAAATAGGATGCACAGATGAAGATGATGACAGGATTGAAGATATTTTAACTACTGGAGCAAGAATTTTCAATTATGAAAGCACATCTTTGCTGACTGAGGAAGCTAATCCTGTAACCGGATTTCAGAAAATCAAGATTGTTGAAGAAGTTGTTGCAGATTCATTGCCGGATGGAGAAAAACAAAATGAATGTGGCAAGGAGTTGAAGTCAAAGTTGCATATGAGTGGTAAATCCTGTGAAGGTAACTCACTTGCTGAAATAGGTGAAGATAATGAAAAATCATTTCGAGTGGTATCACCAAATTCTTCAATGCTTCAGGAAGCTGATCTAGAGATAACAAACAAGCAAGAGAGCCAGACCTCTCAGTCTAATAAGGTGGAAATCCTGGAAAGCCATGTAGAAGCAACGGAGAAGGGGAAGTCTACTCATAAATCAGATGAAATAGTTCAAGACACCAGAAACAAGTGCATGGGAAGCATCAGCCCCACGACACTTCAAGTAGAACCAGTGAACTATTCAGTGCCTCAGGAATCTGTTCTGAGCATTACAAACAAGATCGAGAACCAGACCGCTCAATCTCTCATCGCCGTGACAGGATGCTCTGAGATGGAAATCCTTAAGAGCAGTGTAGAAGAAGTAGCAAAGGAAAGTTCAAGCTTTGGTAATGTTTGGTCAAGAAGAGGGAAGGCTGCTAGTGCTCCTCAGGTTCGAACCAGAAAGAGTAAATTTATGAGCAAAGGTAATGTTGACACCAAAGTTGAAATGGATATCAAGACTAAGTCAGTTGCAAAGGATCCTTTCTTTGTTTTGGATGAAGAAATATTCTCTCCAAATAAGGAAAACTCAGGCTCAGGCGTGTATATGAGAAAGAAAGGAAAGCTGGAAGAAATTAAGCATTCCAAATCACAAAGTTCACAAGCTTTGAAGGCTAATTTTAGTAACATCTATTCAGCTGAAAGGATCAGCTCCATTTCAAAGAAAGATAACCTGACTCCAAAAGTAGCCCAACAATGGAGTTCACCAAGAAAGCCTCTTGAGAGTCATATCAACTTGGCTCCTCCTGAACACGATAATATGGAATTAAAAAAGAACACAGTGAAAAGGGTACCTTTCCAATCACTAACAAACTCTCAAGACTATAGCAAATTAAGGACCCGTGGTCCTGTTTCTGCTGCAAAAAGCATTAAAGATGCCAGTAATTGTGGCCTGATTTCAGAAAACAATTTAGTGAAAAAAGAAAAAGAAGCTGGGACATGGTTGTCTGCATCTCTTCTGAACAAGGAGTCTAGGAAAGCTTTGCAGCTTCTACAAGGTCTCAAGGGGACTCGTTTAATCATTCCAAAATTTGTCATAAGGGAATTGGGCAGCATTAAGGCACAATTCAGATTTTTTAGCAGAACTTCAGCGGCTTCTTTGGCATTGGATTGGATTGAAGAATGCATGGAGAACACAAAGTGGTGGATTCATATCCAAAGCTCAATGGAGGAATGCAGGCTGAGTGCTCCACCCCTTCCTGCGTCGTCACCTCAGAAGACTCAGTTTTTTCCTGGTCCCAAGAGCTCAAAGGTTGAAGAAGATAACATACTTGAGTTTGCTCTTCTATATAAGAGAAAGGAGAAGAATGTTGGACAAATTGTCCTGCTTAGTGATGATGTCACCTTGAAAATAAAATCCAAGGCTGAGGGGTTGCTTAGTGAGACGGTTGAGGAATTTCGGAAGAGTTTAGTGAACCCTTTCTCTGAGAGGTTCATGTGGTCAACGAGCTCTCCACGAGGACTGACTTGGTCTTGCCAAGATGATGAAATTTTAAGGGAGAAATATTGTGGTTTACCATCTAGGGCTGGCTTGAAGCTCATCACTACTCAACAGTTTCGTTGA 3144 0.4087 MAESNSNISKQEEEEEEEGEGGIPVLTVFKNNSIIKNIFIVPNKINNHTLVLGRHPDCNIVLTHPSISRFHLKILSTPSSRTLSLVDLSSVHGTWVCGRKLEPGESVDLKEGDTFTLGISTRLYRLSRVPFVKDPRSDENLKLSVEQGIPVCCDEEMMRKGQSKDEDFEVLRGTETSYLAPNSEIEDKLCGFQKHVLSPPYVQTVEEFDNKEKSEALPELEMPEETNLFCTLREYLKHNICLPAVESVKGTNMKQFQGSLHTQLPSIEKHWLSLLSNIDPAYLDEECDAEVPEIPNESGFGRTLRYNDNVEDEDTFTTGARTSNFENSCSVLGKDIPDSRFPQIKVVEGVSMDSPSYGEEQDICCRKYKSKMHDPNAKSCHEQRNSLVEVLEDIGNKCIKYIDPASFDEKGVTAVTVLPEEYEIGCTDEDDDRIEDILTTGARIFNYESTSLLTEEANPVTGFQKIKIVEEVVADSLPDGEKQNECGKELKSKLHMSGKSCEGNSLAEIGEDNEKSFRVVSPNSSMLQEADLEITNKQESQTSQSNKVEILESHVEATEKGKSTHKSDEIVQDTRNKCMGSISPTTLQVEPVNYSVPQESVLSITNKIENQTAQSLIAVTGCSEMEILKSSVEEVAKESSSFGNVWSRRGKAASAPQVRTRKSKFMSKGNVDTKVEMDIKTKSVAKDPFFVLDEEIFSPNKENSGSGVYMRKKGKLEEIKHSKSQSSQALKANFSNIYSAERISSISKKDNLTPKVAQQWSSPRKPLESHINLAPPEHDNMELKKNTVKRVPFQSLTNSQDYSKLRTRGPVSAAKSIKDASNCGLISENNLVKKEKEAGTWLSASLLNKESRKALQLLQGLKGTRLIIPKFVIRELGSIKAQFRFFSRTSAASLALDWIEECMENTKWWIHIQSSMEECRLSAPPLPASSPQKTQFFPGPKSSKVEEDNILEFALLYKRKEKNVGQIVLLSDDVTLKIKSKAEGLLSETVEEFRKSLVNPFSERFMWSTSSPRGLTWSCQDDEILREKYCGLPSRAGLKLITTQQFR* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0834 1047 PANTHER FHA DOMAIN-CONTAINING PROTEIN PS1 11 1045 - -
Lja5g0834 1047 ProSiteProfiles Forkhead-associated (FHA) domain profile. 50 101 IPR000253 GO:0005515
Lja5g0834 1047 PANTHER TRANSMEMBRANE PROTEIN 18 11 1045 - -
Lja5g0834 1047 Pfam FHA domain 51 118 IPR000253 GO:0005515
Lja5g0834 1047 Gene3D - 2 131 - -
Lja5g0834 1047 Gene3D - 844 998 - -
Lja5g0834 1047 CDD FHA 24 118 IPR000253 GO:0005515
Lja5g0834 1047 Pfam PIN domain 855 990 IPR002716 -
Lja5g0834 1047 SMART FHA_2 49 101 IPR000253 GO:0005515
Lja5g0834 1047 MobiDBLite consensus disorder prediction 1 22 - -
Lja5g0834 1047 SUPERFAMILY SMAD/FHA domain 25 135 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0834 Lja-Chr5 7926111 7930104 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0834 - - lja:Lj5g3v1853220.1 1630.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0834 5 7926111 7930104 Lja5g0834 5 7926111 7930104 ECH