Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0832 ATGGGGGGTTCAATCTTCACTCACTCCCTCGTTCTCTCACACTCTTCTTCTCCTTCTCTCTCCACTCTCTTCTCATCCAAACACCCCATAATTGATTCTACTCCTTCTACCTTTCTCTTCAACCGATTCCATTGCAAACTCACTTCTTCATGGCCTTCAGCTCCTCGCAGTTACTCCTGCTCTGTAAAAAAGATGAAAGCCTTGGGAATTCAGCTAACAGGATCAGCTTCACATGGATACCATCTTGATGCAATGAAGAGCAGGATTGTTCTTCAGATGTTTCGGAGGGCAATGCCAATGGACACCCTTATCTCAAAACAATCTGAGGCGAACGACTTTACAACCACTCATCTTGAAGATTGGGGAAGGCCATCCACATGGGTTTCAGCATTCTTGTTTGGACAAACTATATCATTGATTTCTCCTGATGTTTCATATGCAAGCAGCTCTGTGAAGATAAATGAGATATATGAGGTTGGAGAATTGTTTGATTTAGGGATCCAACTAATATACTTGATATTGTTATTGAGTTTGCTAGGGTTTGGGACTTTCTATGTGATCCGCCAAGTTCTTGTCCGGAGAGAACTTGACCTTTCTGCCAAAGAGCTGCAGGAACAAGTAAGAAGTGGTGATGCAAGTGCAATTGGACTTTTTGAACTTGGAGCAGTGATGCTTCGGAGGAAATTCTACCCAGCTGCTACCAAATACTTGCTTCAAGCAATTGAGAAATGGGATGGAGAAAACCAGGATCTTGCCCAGGTTCACAATGCTCTCGGTGTCAGCTATGTCCGCGATGGGAAGCTTGAGAAGGGAATTGCTCAGTTTGAGACAGCTGTGAAGATTCAACCAGGGTATGTCACAGCATGGAACAATCTTGGTGATGCTTATGAGAGTAAAAAGGATTATAAGTCTGCTCTCAAGGCATTTGAAGAAGTTCTACTGTTCGATCCCAACAACCAGATTGCTCAGCCGAGGAGAGATGCTTTGAAGGACCTTGTTCAAATGTACAAAGGAGCTCCTGTCAAATACAATGAGAAGAAATAA 1044 0.433 MGGSIFTHSLVLSHSSSPSLSTLFSSKHPIIDSTPSTFLFNRFHCKLTSSWPSAPRSYSCSVKKMKALGIQLTGSASHGYHLDAMKSRIVLQMFRRAMPMDTLISKQSEANDFTTTHLEDWGRPSTWVSAFLFGQTISLISPDVSYASSSVKINEIYEVGELFDLGIQLIYLILLLSLLGFGTFYVIRQVLVRRELDLSAKELQEQVRSGDASAIGLFELGAVMLRRKFYPAATKYLLQAIEKWDGENQDLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDYKSALKAFEEVLLFDPNNQIAQPRRDALKDLVQMYKGAPVKYNEKK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0832 347 PANTHER TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC 56 340 - -
Lja5g0832 347 ProSiteProfiles TPR repeat region circular profile. 286 319 - -
Lja5g0832 347 ProSiteProfiles TPR repeat profile. 252 285 IPR019734 GO:0005515
Lja5g0832 347 Pfam Tetratricopeptide repeat 257 316 - -
Lja5g0832 347 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 56 340 - -
Lja5g0832 347 Gene3D Tetratricopeptide repeat domain 186 345 IPR011990 GO:0005515
Lja5g0832 347 ProSiteProfiles TPR repeat profile. 286 319 IPR019734 GO:0005515
Lja5g0832 347 SMART tpr_5 286 319 IPR019734 GO:0005515
Lja5g0832 347 SMART tpr_5 252 285 IPR019734 GO:0005515
Lja5g0832 347 SMART tpr_5 214 247 IPR019734 GO:0005515
Lja5g0832 347 SUPERFAMILY TPR-like 212 323 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0832 - - ahf:112712552 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0832 5 7905134 7909860 Lja5g0832 5 7905134 7909860 ECH