Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0812 ATGAGGGTTTTGTTGGCTTCTTGTGTTGCGTTGTTGATCCACTTTTGCAGTGCTTCTGAACCACTCTCGGTGGATGGCACGGTGTTGGTACTCGACGAATCCAACTTCGATTCCGCTATCTCCTCCTTCGATCACATCTTGGTTGACTTTTACGCTCCCTGGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGTTAGATGCAGCTGCCCCTGTACTTGCAGCCTTGAAGGATCCCATAGTCATAGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCTAAAAAACATGATGTCGATGCGTATCCAACCATTCTTCTGTTTAATCACGGTGTACCCACAGAATACCGTGGACCAAGGAAAGCAGATGTACTTGTTCGTTATCTAAAGAAATTTGCTGCTTCTGATGTTTCCGTTCTTGATTCAGATTCTGCTGTGAACAATTTTGTTGAAGAAGCTGGCACTTTTTTCCCATTATATATAGGTTTTGGGCTGAATGAGTCGGTAATAGAAAAGTTAGCCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCTAAGGATTTCTCAGAGGATCTTATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCTCTTAATCCACAGTTCAATGAGCGGAGCACATTCTATGGCCCCTATGAAGAGAACTTTTTGGAAGATTTTGTAAAACAAAACCTGATTCCTTTGGTCGTGCCAGTTTCCTATGACACACTTAAGTTGATGAAAGCTGATGGTAGGAAAATAGTTTTGACAATTGTGGAGGATGAAAATGAAGAAAATTCAAAGGAACTGATTAAGTTATTGAAGGGTGCTGCATCTGCAAATCGTGACTTAATATTTGGTTATGTTGGAGTTAAACAGATGGACGAATTCGCTGACAAATTTGATACCAGTACTAAACTACCAAAGATGGTCATTTGGGATAAAAGTGATGACTACCTTTCTGTTGTTGGTTCAGAAAGCATTGAAGGAGAGGATCAGGGAACTCAAATCACTAAATTTCTAGAAGGATATAGAGAAGGAAGAACTGTACAGAAAAGACTTAGTGGGCCTTCACTGATGCAATTTATCCATCGATCTTTTGACATTAGAATGGTGTACATGATTGTATTTATGGTTGCAGTATTCATACTTATTCAGACCCTTGGCGGTAAAGGAGGTGATGAACACCATAGAGTACCAAATCAAGAACAGGTAGATCATGCAAGCAGCTCTGTTTCAGAAGTTGAAAGCAAAGAAGAGTATAAACCAGGAGACAAAAAGGAAGATTAA 1296 0.4035 MRVLLASCVALLIHFCSASEPLSVDGTVLVLDESNFDSAISSFDHILVDFYAPWCGHCKRLSPELDAAAPVLAALKDPIVIAKVDADKHTRLAKKHDVDAYPTILLFNHGVPTEYRGPRKADVLVRYLKKFAASDVSVLDSDSAVNNFVEEAGTFFPLYIGFGLNESVIEKLAIKYKKNAWFSVAKDFSEDLMVLYDFDKIPALVSLNPQFNERSTFYGPYEENFLEDFVKQNLIPLVVPVSYDTLKLMKADGRKIVLTIVEDENEENSKELIKLLKGAASANRDLIFGYVGVKQMDEFADKFDTSTKLPKMVIWDKSDDYLSVVGSESIEGEDQGTQITKFLEGYREGRTVQKRLSGPSLMQFIHRSFDIRMVYMIVFMVAVFILIQTLGGKGGDEHHRVPNQEQVDHASSSVSEVESKEEYKPGDKKED* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0812 431 PANTHER PROTEIN DISULFIDE ISOMERASE 9 430 - -
Lja5g0812 431 PRINTS Thioredoxin family signature 97 108 - -
Lja5g0812 431 PRINTS Thioredoxin family signature 46 54 - -
Lja5g0812 431 PRINTS Thioredoxin family signature 54 63 - -
Lja5g0812 431 MobiDBLite consensus disorder prediction 395 431 - -
Lja5g0812 431 Gene3D Glutaredoxin 224 360 - -
Lja5g0812 431 Pfam Thioredoxin 28 130 IPR013766 -
Lja5g0812 431 CDD PDI_a_family 29 128 - -
Lja5g0812 431 ProSitePatterns Thioredoxin family active site. 47 65 IPR017937 -
Lja5g0812 431 SUPERFAMILY Thioredoxin-like 167 244 IPR036249 -
Lja5g0812 431 Pfam Thioredoxin-like domain 172 326 - -
Lja5g0812 431 SUPERFAMILY Thioredoxin-like 233 359 IPR036249 -
Lja5g0812 431 Gene3D Glutaredoxin 18 141 - -
Lja5g0812 431 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-2 9 430 - -
Lja5g0812 431 ProSiteProfiles Thioredoxin domain profile. 9 133 IPR013766 -
Lja5g0812 431 MobiDBLite consensus disorder prediction 414 431 - -
Lja5g0812 431 SUPERFAMILY Thioredoxin-like 21 131 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0812 Lja-Chr5 7684880 7690184 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0812 K09580 - gmx:100791778 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0812 5 7684880 7690184 Lja5g0812 5 7684880 7690184 ECH