Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0799 ATGCCTCTGATTCCAAAAAACAACAACAAAAATGCTCTCTTCTCTGTTCCCACACTCTTCCTCTTCTTCACCCTTCTCTCTGTTCTCTCTCTCATATTCTTCATCTTCTTCTCCTCCACCACCACCACCACCACCACTTCACACTCTTCTCTCTCTCTTCAATCTCCCACAAACTCCGGCATCAATGTCTACGTAGCCGAGCTTCCCAGATCCCTCAACTACGGCCTCCTGAACCGCTACTGGTCCATCGACGGCGATTCCCGACTCGGCAGCGACCTGGACCATGAGATTCGATCGAGCAATTTGGGCAAAACCCTAGAATTTCCACCGTACCCTGAGAATCCACTGATCAAACAGTACAGCGCGGAGTATTGGATCATGGGGGATCTGATGACCCGACCCGAATTGCGAACTGGGTCGTTCGCAAAACGGGTTCTTGACGCACGTGACGCCGACGTGGTCTTCGTTCCCTTCTTCGCCACTATCAGCGCTGAAATGCAACTGGGTATGGCGAAAGGTGCGTTCAGGAAGAAGGTTGGGAATGAGGATTATCAGAGGCAGAGGGAGGTTATGGATTTTCTCAAGAAAACACCAGCTTGGAACCGTTCTGGTGGCAGAGACCATGTTTTTGTGCTCACTGACCCAGTTGCAATGTGGCATGTTAAAGATGAGATAGCCCCAGCGATTCTCCTTGTCGTGGATTTCGGTGGTTGGTACAGACTTGACTCAAAATCATCCAACTGTAGCTCATCTGAAATGATTCAACACACCCAGGTTTCGGTGCTTAAAGATGTGATTGTGCCATACACTCATTTACTTCCCAGGTTGCAGTTGTCAGAGAACCAGAAGCGCCACCATCTTCTGTATTTTAAGGGAGCTAAACATAGGCACCGGGGAGGCCTGATTAGAGAGAAGTTATGGGATCTACTGATTAATGAGCCTGGTGTTATAATGGAGGAAGGCTTCCCTAATGCAACTGGGAAAGAACAATCGATACGAGGGATGCGAACATCAGAGTTTTGCCTCCATCCAGCTGGTGATACACCTACTTCATGCCGACTTTTTGATGCCGTTCAGAGTCTTTGTATACCTGTTATTATCAGTGACAACATTGAGCTCCCATTTGAAGGTATGGTGGACTATTCCGAATTTTCCGTTTTCGTGGCAGTGGGTGATGCCCTGAAACCAAGTTGGCTAGTCAATCATCTTCAAAGCTTTTCAAAAGAACAGAAAGACAGGTTCCGCCAAAACATGGCTCAGGTACGGCCCATGTTTGTCTACGATAATGGTCACCAAGGTGGTATTGGACCTATACCTTTGGATGGTGCAGTGAATCATATATGGAAGAAAGTTCACCAAAAACTGCCTGCTATTAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCTGGTGTATCAGTTCCACGTCGTTGTCATTGCACTTGA 1446 0.473 MPLIPKNNNKNALFSVPTLFLFFTLLSVLSLIFFIFFSSTTTTTTTSHSSLSLQSPTNSGINVYVAELPRSLNYGLLNRYWSIDGDSRLGSDLDHEIRSSNLGKTLEFPPYPENPLIKQYSAEYWIMGDLMTRPELRTGSFAKRVLDARDADVVFVPFFATISAEMQLGMAKGAFRKKVGNEDYQRQREVMDFLKKTPAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSKSSNCSSSEMIQHTQVSVLKDVIVPYTHLLPRLQLSENQKRHHLLYFKGAKHRHRGGLIREKLWDLLINEPGVIMEEGFPNATGKEQSIRGMRTSEFCLHPAGDTPTSCRLFDAVQSLCIPVIISDNIELPFEGMVDYSEFSVFVAVGDALKPSWLVNHLQSFSKEQKDRFRQNMAQVRPMFVYDNGHQGGIGPIPLDGAVNHIWKKVHQKLPAIKEAIIREKRKPPGVSVPRRCHCT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0799 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 471 IPR004263 GO:0006486|GO:0016757
Lja5g0799 481 Pfam Exostosin family 58 402 IPR040911 -
Lja5g0799 481 PANTHER EXOSTOSIN FAMILY PROTEIN 16 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0799 Lja-Chr5 7415338 7418599 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0799 - - adu:107467786 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0799 5 7415338 7418599 Lja5g0799 5 7415338 7418599 ECH