Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0794 ATGGTCAATGCTGCAGTTCAAGAAATGATGTTCTTTGCAATTGCCAAACATCAACTCACAGTGGTAGGAAGTGATGGTAGCTATGTAATGCCATTGAAGGTAGATTACATAACAATATCTCCTGGACAAACAATGGATGTGTTACTAGAAGCAAACCAACCATTAGATAACTATTACATGGCTTCCAAAGTATTTACAAGTGCACTTGATGTTCCCTTTGATAACACCACAACCACTGCTATAGTACAATACAGGGGCAATTACATTCCAACTTCAAGAACCCCTTCTTTGCCCTCACTACCAGATTCAGGGGACATTGTCTCCTCTGTTAATATAATAAGTGAACTAAAAAGTTTAGCTGATGAAGAACACCCAATTGATGTTCCCTTAAATATAACAACAAACTTGTTCTTCACAATCTCAATTAACACATTACCATGTGATCCAAATGGGAATTCAACATGTGTTGGCCCCAATGGAAACCGCTTCTCAGCAAGCATGAACAACATAAGCTTTCAAATGCCAGCAGACAACAACATTTTGCAAGCTTACTACAACAATATTAGTGGTGTGTTTGGGGAAAATTTCCCTGATGTGCCAGCTTTGCCTTTTGATTTCACTGGTAGTAATCTTCCTGCATTTCTGAATACTCCATCAGTGGCTACAGAGGTGAATGTGCTTGAGTATGACTCAACAGTGGAGATTGTTCTTCAGGGGACTAACTTGTTTGAAGGTATTGAGCATCCTATGCACCTGCATGGCATGAGTTTCTATGTGGTTGGATGGGGATTTGGAAACTTTGACAAGGAAAAGGATCCATTGGGGTATAATCTTGTTGACCCTCCTTATCAGAATACCGTAGTTATACTAAAAAACGGTTGGACAACCATAAGATTCAGAGCTAAAAATCCAGGTGTATGGTTAATGCATTGCCATATAGACCGACATGTCACATGGGGAATGGCTACTACTTTCATTGTGAAGGATGGTAATAATCCTGAAGAGAAGATGCTACCACCACCATTAGACATGCCACAATGTTAA 1044 0.3966 MVNAAVQEMMFFAIAKHQLTVVGSDGSYVMPLKVDYITISPGQTMDVLLEANQPLDNYYMASKVFTSALDVPFDNTTTTAIVQYRGNYIPTSRTPSLPSLPDSGDIVSSVNIISELKSLADEEHPIDVPLNITTNLFFTISINTLPCDPNGNSTCVGPNGNRFSASMNNISFQMPADNNILQAYYNNISGVFGENFPDVPALPFDFTGSNLPAFLNTPSVATEVNVLEYDSTVEIVLQGTNLFEGIEHPMHLHGMSFYVVGWGFGNFDKEKDPLGYNLVDPPYQNTVVILKNGWTTIRFRAKNPGVWLMHCHIDRHVTWGMATTFIVKDGNNPEEKMLPPPLDMPQC* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0794 347 ProSitePatterns Multicopper oxidases signature 2. 310 321 IPR002355 GO:0005507
Lja5g0794 347 Pfam Multicopper oxidase 2 87 IPR001117 -
Lja5g0794 347 Gene3D - 154 347 IPR008972 -
Lja5g0794 347 Pfam Multicopper oxidase 218 330 IPR011706 GO:0005507|GO:0016491
Lja5g0794 347 CDD CuRO_3_LCC_plant 191 330 IPR034289 GO:0005507
Lja5g0794 347 PANTHER LACCASE 1 347 - -
Lja5g0794 347 ProSitePatterns Multicopper oxidases signature 1. 305 325 IPR033138 -
Lja5g0794 347 SUPERFAMILY Cupredoxins 129 347 IPR008972 -
Lja5g0794 347 SUPERFAMILY Cupredoxins 2 106 IPR008972 -
Lja5g0794 347 Gene3D - 1 121 IPR008972 -
Lja5g0794 347 PANTHER MULTI-COPPER OXIDASE 1 347 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0794 Lja-Chr5 7367216 7368362 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0794 K05909 - qsu:112034097 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0794 5 7367216 7368362 Lja5g0794 5 7367216 7368362 ECH