Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0793 ATGAAAATCCTATTCCTCCAAGTTTTGCTATTTATGTTCTTCAATCTCCTGCTCACTTGTCTGGCACTAAGGCATCACAGGTTTGAGGTGAGAGATGTTTCGTACACAAAACTTTGCAGCACAAAAAACATCTTGACGGTAAACGGGCAGTTTCCTGGGCCAACTCTTTATGTGACCAAAGGAGAAACCATTATTGTTCATCTCTATAACCGAGCTAACTACAACATCACCATCCACTGGCATGGAGTCGACCAACCAAGATATCCATGGTCAGATGGCCCTGAATATGTGACACAATGTCCGATTAGACCCGGTGGGAAGTTCAGTCAGAAGGTCATATTTTCTGAAGAAGAAGGCACACTATGGTGGCATGCTCACAGTGATTGGTCTCGTGCCACCGTTCATGGGGCTATTGTGGTAAAACCCAAGCTTGGAACTACTTATCCATTTCCAAACCCCCACAAAGAGGTCCCCATTATATTAGGTGAATGGTGGAAGAAAGATGTTGTTGAGGTTTTGTTAAGCCAAAATTACAAGTACTACAATTCTCGACACCATGGTGCAAAAGTGGTTTCTCGACAGAACGGGTTTGGCGAAGCCGGCAACTCAGCACACGATGTCCCTCAAAGACAAGTTAGTAAAAGCCATAACTCGACACACTCAGAAGATGAAGAAATCTCGATCATCTTAATGGAAGAGGCAGTTACCGAATAA 714 0.4384 MKILFLQVLLFMFFNLLLTCLALRHHRFEVRDVSYTKLCSTKNILTVNGQFPGPTLYVTKGETIIVHLYNRANYNITIHWHGVDQPRYPWSDGPEYVTQCPIRPGGKFSQKVIFSEEEGTLWWHAHSDWSRATVHGAIVVKPKLGTTYPFPNPHKEVPIILGEWWKKDVVEVLLSQNYKYYNSRHHGAKVVSRQNGFGEAGNSAHDVPQRQVSKSHNSTHSEDEEISIILMEEAVTE* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0793 237 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Lja5g0793 237 PANTHER MULTI-COPPER OXIDASE 9 174 IPR045087 -
Lja5g0793 237 PANTHER LACCASE 9 174 - -
Lja5g0793 237 MobiDBLite consensus disorder prediction 195 223 - -
Lja5g0793 237 SUPERFAMILY Cupredoxins 24 167 IPR008972 -
Lja5g0793 237 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Lja5g0793 237 Gene3D - 22 151 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0793 Lja-Chr5 7337068 7338703 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0793 K05909 - lja:Lj5g3v1887290.1 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0793 5 7337068 7338703 Lja5g0793 5 7337068 7338703 ECH