Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0792 ATGAAAATCCTATTCCTCCAAGTTTTGCTATTTTTGTTCATCAATCTCCTGCTCACTTGTCTGGCACTGAGGCATCACAAGTTTGAGGTGAGAGAAGTTTCGTACACAAAACTTTGCAGCACAAAAAACATCTTGACCGTAAACGGGCAGTTTCCTGGGCCAACTCTTTATGTGACCAAAGGAGAAACCATTATTGTTCATGTCTATAACCGAGCTAACTACAACATCACAATCCATTGGCATGGAGTCAACCAACCAAGATATCCATGGTCAGATGGCCCTGAATATGTGACACAATGTCCGATTCAACCCGGTGGGAAGTTCAATCAGAAGGTCATATTTTCTGAAGAAGAAGGCACGCTATGGTGGCATGCTCACAGTGACTGGTCTCGCGCCACCGTTCATGGGGCTATTGTGGTACAACCTAAGCTTGGAACTACTTATCCATTTCCAAAACCCCACAAAGAGGTCCCCATTATATTAGGTGAATGGTGGAAGAAAGATGTTGTTGAGGTTCATAAAGATTTTCAGAAATCTGGAGGAGCTCCTGTAGTTTCTGATGCTTACACAATTAATGGTCATCCCGGTGATCTATATCCATGTTCAAAGAACGAAACATTCAAGCTTAGGGTTGATTATGGCAAAACATATCTTCTTCGAATGGTTAATGCTGTAGTTCAAGAAATGTTGTTCTTTGCAATTTCCAAACATCAACTCACAGTGGTAGGAACTGATGGCAGTTATGTAAAGCCATTGAAGGTAGATTACATAACAATATCTCCTGGACAAACAATGGATGTGTTACTAGAAGCAAACCAACCATTAGATAACTATTACATGGCTTCCAAAGCATATTCAAGTGCACTTGGCGTTCCCTTTGATAACACCACAACCACTGCTATAGTGCAATACAAGGGGAATTATATTTCAACTTCAAGCACCCCTTCTTGGCCCTCACTTCCAAATTCAAGAGACACCAACTCCTCTATTAATATCATAAGTGAACTGAAAAGTTTAATTGATGAAGAACACCCAATTGATGTTCCCTTAAACATAACAACAAACATGTTCTTCACAATCTCAGTTAACACATTACCTTGTGATCCAAATGGTAATTCAACATGTGATGGCCCCAATGGAAACCGTCTCTCAGCTAGCATGAACAACGTGAGCTTTCAAATGCCAACAGGCAACAACATTTTGCAAGCTTACTACAACAACATTAGTGGTGTGTTTGGGGAAAATTTCCCTAATGTGCCAATTTTGTCTTATGATTTCACTGGTAGTAATCTTCCAGCATTTCTGAATACTCCATCAGTTTCTACAGAGGTGAATGTGCTTGAGTATGACTCAACAGTGGAGATTGTTCTTCAGGCGACTAACTTGTTTGCAGGTATAGAGCATCCTATGCACCTGCATGGCACGAGTTTCTATGTGGTTGGATGGGGATTTGGGAACTTTGACAAAGAAAAGGATCCATTAGGGTATAATCTTGTTGACCCTCCTTATCAGAATACCGTAGCTATACCAAAAAACGGTTGGACAACCATAAGATTCAGAGCTAAAAATCCAGGTGTATGGTTCATGCATTGCCATATAGAGCGACATGTCAGTTGGGGAATGGCTATGACTTTCATTGTGAAGGATGGTAATAACCCTGAAGAGAAGATGCTCCCACCACCATTAGACATGCCACAATGTTAA 1704 0.4079 MKILFLQVLLFLFINLLLTCLALRHHKFEVREVSYTKLCSTKNILTVNGQFPGPTLYVTKGETIIVHVYNRANYNITIHWHGVNQPRYPWSDGPEYVTQCPIQPGGKFNQKVIFSEEEGTLWWHAHSDWSRATVHGAIVVQPKLGTTYPFPKPHKEVPIILGEWWKKDVVEVHKDFQKSGGAPVVSDAYTINGHPGDLYPCSKNETFKLRVDYGKTYLLRMVNAVVQEMLFFAISKHQLTVVGTDGSYVKPLKVDYITISPGQTMDVLLEANQPLDNYYMASKAYSSALGVPFDNTTTTAIVQYKGNYISTSSTPSWPSLPNSRDTNSSINIISELKSLIDEEHPIDVPLNITTNMFFTISVNTLPCDPNGNSTCDGPNGNRLSASMNNVSFQMPTGNNILQAYYNNISGVFGENFPNVPILSYDFTGSNLPAFLNTPSVSTEVNVLEYDSTVEIVLQATNLFAGIEHPMHLHGTSFYVVGWGFGNFDKEKDPLGYNLVDPPYQNTVAIPKNGWTTIRFRAKNPGVWFMHCHIERHVSWGMAMTFIVKDGNNPEEKMLPPPLDMPQC* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0792 567 Gene3D - 373 567 IPR008972 -
Lja5g0792 567 Gene3D - 154 341 IPR008972 -
Lja5g0792 567 PANTHER MULTI-COPPER OXIDASE 10 567 IPR045087 -
Lja5g0792 567 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Lja5g0792 567 Gene3D - 22 150 IPR008972 -
Lja5g0792 567 Pfam Multicopper oxidase 439 550 IPR011706 GO:0005507|GO:0016491
Lja5g0792 567 CDD CuRO_2_LCC_plant 157 304 IPR034285 -
Lja5g0792 567 Pfam Multicopper oxidase 156 307 IPR001117 -
Lja5g0792 567 ProSitePatterns Multicopper oxidases signature 2. 530 541 IPR002355 GO:0005507
Lja5g0792 567 PANTHER LACCASE 10 567 - -
Lja5g0792 567 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Lja5g0792 567 SUPERFAMILY Cupredoxins 351 567 IPR008972 -
Lja5g0792 567 SUPERFAMILY Cupredoxins 150 330 IPR008972 -
Lja5g0792 567 SUPERFAMILY Cupredoxins 24 167 IPR008972 -
Lja5g0792 567 TIGRFAM laccase: laccase 23 567 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lja5g0792 567 ProSitePatterns Multicopper oxidases signature 1. 525 545 IPR033138 -
Lja5g0792 567 CDD CuRO_3_LCC_plant 411 550 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0792 Lja-Chr5 7320828 7323772 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0792 K05909 - qsu:112034097 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0792 5 7320828 7323772 Lja5g0792 5 7320828 7323772 ECH