Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0791 ATGAGAAAAATGTTCTTATATGAGAACATAGGAATAAATCATGATCAGGTCCCCATTATATTAGGTGAATGGTGGAAGAAAGATGTTGTTGAGGTTTATAAAGATTTTCGGAAATCTGGAGGAGATCTTGTAGTTTCTGATGCTTACACAATTAATGGTCAACCGGGTGATCTATATCCATGCTCAAAGAACGAAACCTTCAAGCTTAGGGTTGATTATGGCAAAACATATCTTCTCAGAATGGTCAATGCTGCAGTTCAAGAAATGTTGTTCTTTGCAATTGCCAAACACCAACTCACAGTGGTAGGAACTGATGGTAGCTATGTAAAGCCATTGAAGGTAGATTACATAACAATATCTCCTGGGCAAACAATGGATGTGTTACTAGAAGCAAACCAACCATTAGATAACTATTACATGGCTTCCAAAGCATATTCAAGTGCACTTGGCGTTCCCTTTGATAACACCACAACCACTGCTATAGTACAATACAAGGGGAATTACATTCCAACTTCAAGCACCCCTTCTTTGCCCTCACTTCCAGATTCAGGGGACACCAACTCCTCTATTAATATCATAAGTGAACTGAAAACTTTAGCTGATGAAGAACACCCAATTGAGGTTCCCTTAAACATAACAACAAACTTGTTCTTCACAGTCTCAGTTAACACATTACCGCGTGATTCAAATGGTAATTCAACATGTGATGGCCCCAATGGAAACCGTCTCTCAGCTAGCATGAACAACGTGAGCTTTCAAATGCCAGCTGACAACAACATTTTGCAAGCTTACTACAACAACATTAGTGGTGTGTTTGGGGAAAATTTCCCTGATGTGCCAACTTTTCCTTTTGATTTCACTGGTAGTAATCTTCCTGCGTTTCTGAATACTCCATCAGTGGCTACAGAGGTGAATGTGCTTGAGTATGACTCAACAGTGGAGATTGTTCTTCAGGGGTTAAACGTGTTGGCAGGTACAGAGCATCCTATACACATGCATGGCACCAGTTTCTTTGTGGTTGGATGGGGATTTGGGAACTTTGACAAGGAAAAGGATCCATTGAATTATAATCTTGTTGACCCTCCTTATCAGAATACCGTAGCTATACCCAAAAACGGTTGGACAGCCATAAGATTCAGAGCTAAAAATCCAGGTGTATGGTTCATGCATTGCCATTTAGAGCGACATGCCAGTTGGGGTATGGCTATGACTTTCATTGTGAAGGATGGTAACAACCCTGAAGAGAAGATGCTACCACCACCATTAGACATGCCACAATGTCAATTCATTGAAGCAGTATAG 1302 0.4055 MRKMFLYENIGINHDQVPIILGEWWKKDVVEVYKDFRKSGGDLVVSDAYTINGQPGDLYPCSKNETFKLRVDYGKTYLLRMVNAAVQEMLFFAIAKHQLTVVGTDGSYVKPLKVDYITISPGQTMDVLLEANQPLDNYYMASKAYSSALGVPFDNTTTTAIVQYKGNYIPTSSTPSLPSLPDSGDTNSSINIISELKTLADEEHPIEVPLNITTNLFFTVSVNTLPRDSNGNSTCDGPNGNRLSASMNNVSFQMPADNNILQAYYNNISGVFGENFPDVPTFPFDFTGSNLPAFLNTPSVATEVNVLEYDSTVEIVLQGLNVLAGTEHPIHMHGTSFFVVGWGFGNFDKEKDPLNYNLVDPPYQNTVAIPKNGWTAIRFRAKNPGVWFMHCHLERHASWGMAMTFIVKDGNNPEEKMLPPPLDMPQCQFIEAV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0791 433 PANTHER MULTI-COPPER OXIDASE 14 427 IPR045087 -
Lja5g0791 433 Gene3D - 232 432 IPR008972 -
Lja5g0791 433 SUPERFAMILY Cupredoxins 211 427 IPR008972 -
Lja5g0791 433 CDD CuRO_2_LCC_plant 17 164 IPR034285 -
Lja5g0791 433 PANTHER LACCASE 14 427 - -
Lja5g0791 433 ProSitePatterns Multicopper oxidases signature 1. 385 405 IPR033138 -
Lja5g0791 433 Gene3D - 13 201 IPR008972 -
Lja5g0791 433 Pfam Multicopper oxidase 16 167 IPR001117 -
Lja5g0791 433 SUPERFAMILY Cupredoxins 15 190 IPR008972 -
Lja5g0791 433 CDD CuRO_3_LCC_plant 271 410 IPR034289 GO:0005507
Lja5g0791 433 TIGRFAM laccase: laccase 14 427 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lja5g0791 433 Pfam Multicopper oxidase 299 410 IPR011706 GO:0005507|GO:0016491
Lja5g0791 433 ProSitePatterns Multicopper oxidases signature 2. 390 401 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0791 Lja-Chr5 7311361 7313933 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0791 K05909 - qsu:112034097 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0791 5 7311361 7313933 Lja5g0791 5 7311361 7313933 ECH