Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0749 ATGGCTCCGGCTAGCAAGGCTGAGAAGAAGGCAGCAGTGGATGCAGCTGCATGGATGTTCAACGTTGTCACCTCTGTTGGAATTATAATTGTAAACAAAGCTTTGATGGCTACATATGGCTTCAGTTTTGCTACAACATTAACAGGTCTTCATTTCGTTACCACAACTTTGATGACTGGCGTTTTAAGGATGCTCGGATATGTCCAGCCATCTCATTTACCCTTGTCTGAACTTTTGAAGTTTGTTGTCTTCGCTAACTTCTCTATCGTTGGAATGAATGTCAGTCTAATGTGGAATTCAGTTGGATTCTATCAAATTGCTAAGTTGAGTATGATCCCTGTATCTTGCCTGTTGGAAGTTGTTCTAGACAAGATTCGGTATTCAAGAGACACAAAACTGAGCATAGGTGTAGTTCTTTTGGGCGTTGGTGTTTGCACTGTTACTGATGTGAGTGTTAACACAAAAGGTTTTATTGCTGCCTTAATAGCAGTATGGAGCACTGCTCTGCAACAATATTATGTTCATTATCTTCAACGAAAGTATTCACTAAGCTCATTCAACCTTTTGGGGCACACAGCGCCTGCTCAGGCTGGATCACTACTGTTAGTGGGCCCGTTTCTAGACTATTGGTTGACAAACTACAGAGTCGATCAATATGCTTATGACGCATACTCACTGATGTTCATAATTCTGTCATGCACCATTGCAGTTGGGACCAACCTCAGCCAGTTTATCTGCATTGGAAGATTCACCGCAGTTTCTTTCCAAGTACTAGGCCACATGAAGACAATACTTGTCTTGATAATGGGGTTCTTTTTCTTTGGGAGGGAGGGTCTCAATCTTCATGTGGTTTTAGGGATGGTAATAGCTGTGATTGGAATGATATGGTATGGCAATGCCTCATCAAAGCCTGGTGGAAAAGAACGCTGGAGTCACTCTCTCCCCACCAGCAAAACATAA 960 0.424 MAPASKAEKKAAVDAAAWMFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFVTTTLMTGVLRMLGYVQPSHLPLSELLKFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNTKGFIAALIAVWSTALQQYYVHYLQRKYSLSSFNLLGHTAPAQAGSLLLVGPFLDYWLTNYRVDQYAYDAYSLMFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVVLGMVIAVIGMIWYGNASSKPGGKERWSHSLPTSKT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0749 319 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Lja5g0749 319 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 6 7 309 IPR031089 GO:0005338|GO:0015780
Lja5g0749 319 PANTHER SOLUTE CARRIER FAMILY 35 7 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0749 Lja-Chr5 6878597 6882701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0749 18 318 Organic Solute Cotransporters AT1G77610 25.857 1.82e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0749 - - vvi:100854983 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0749 5 6878597 6882701 Lja5g0749 5 6878597 6882701 ECH