Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0744 ATGGAGAAAAGCAAGTCATTTCCTGAATATTCCTGCTCCTACACAGAATTTGGGTTTAGTAGAGAAAGATCCAAGTCATACAATTTCAATGGACCTAGCGAGAAGGGAAGTGGGTTTTATGCATCAAGTGATCCAGAGCTTAAGAGGAAGAAGAGAATCAAGTCCTATAATGTGTTGACAGTGGAGGGAAAGGTTAAAACCAGTGTGAGAAACAGCTTCAAGTGGATCAAGAACAAGTTCACCGATATTCGCTATGGTGTGTGA 264 0.4091 MEKSKSFPEYSCSYTEFGFSRERSKSYNFNGPSEKGSGFYASSDPELKRKKRIKSYNVLTVEGKVKTSVRNSFKWIKNKFTDIRYGV* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0744 87 Pfam Domain of unknown function (DUF3511) 43 86 IPR021899 -
Lja5g0744 87 PANTHER OS06G0686600 PROTEIN 1 82 - -
Lja5g0744 87 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0744 Lja-Chr5 6847834 6848528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0744 - - gmx:100776380 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0744 5 6847834 6848528 Lja5g0744 5 6847834 6848528 ECH
Lja2g2799 2 43352070 43352487 Lja5g0744 5 6847834 6848528 PCT